Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq8042 358 8e-94 seq9616 170 2e-37 seq15666 127 3e-24 seq14149 84.2 3e-11 seq6053 84.2 3e-11 seq1552 84.2 3e-11 >seq8042 Length=962 Score = 358 bits (396), Expect = 8e-94 Identities = 487/673 (72%), Gaps = 15/673 (2%) Strand=Plus/Plus Query 101715 GTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCGACTGG 101774 |||||||||||| | ||| || ||||| ||| ||||| ||||| ||||| || ||| Sbjct 64 GTTGCCTCTTGGAAGTACTTCCTCAGGGAATTGGAAGTTCTCATGAGGTTGTTCT--TGG 121 Query 101775 --TGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTCTCG 101832 ||||| |||| ||| | ||||||||| | ||| |||||||| || ||||| ||||| Sbjct 122 ACTGCCATCCATAAACGGATACCTTCATTAAGTAGTATGTTCTTAGTATAGAATGTCTCA 181 Query 101833 AACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTG 101892 |||||||| || ||||| || | | ||| || |||| ||||||||| || | ||||||| Sbjct 182 AACTCTGGGTCCTCTGCAGCCTTTA-CTCCTGAGATATAAAGTCATATGCTCTAAGGTTG 240 Query 101893 AGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAGAGC 101952 | || || || || || || || ||| ||||||| || || || || || || Sbjct 241 AATGCTAGTCCTATTATTCCTATAGAAGAGGTCCACATTCCTGCTACTGGTACTAATAGT 300 Query 101953 ATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAGAAA 102012 | ||||| || | ||| |||||||| |||||| | || | | |||||||||||| Sbjct 301 AGGAAGAAGTGAAGCCATCTCTTATTGGAAAATGCTACTCCGAGTACTTGAGACCAGAAT 360 Query 102013 CGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTGAAA 102072 | || ||||| | ||| || |||||||| || ||| || | | ||||| | |||| Sbjct 361 CTATTAGCTGTTAGCATAGAGTAAGTCTCCTCAGGTTGCGTTGGAGAGAATGATCTGAAG 420 Query 102073 GT---GTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || |||||| ||||||| ||| | |||||| | || ||| |||| || || Sbjct 421 GTTGTGTAAGCTTGA---CCATCTTGATATATAGTGTTAACTACTGTGGCACCATGTATA 477 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 ||||| | || ||| |||||| ||| ||||| | |||||||||||||||||||| || Sbjct 478 GCTGATAAAAGAGCTGCTCCCAAGATTCCTGCTATTCCCATCATATGGAATGGGTTTAGA 537 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||| || || ||||| |||||||| || ||||| || || || |||||||| ||| | Sbjct 538 GTCCAATTGTGAAAGCCTTGTAGGAATAGGAGGAACCTGAAGATGGCTGCAACTCCATAG 597 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 || |||||||||||| ||| || || | ||| || |||| | ||||||| | Sbjct 598 CTAGGTGCAAAGAACCAAGAGGATTGACCTAAAGGGTAAATGACGA--ACACTGATATGT 655 Query 102310 ACAG--CGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAG 102367 | || ||||| || | ||| || | ||||||||||||||| || | | ||| || | Sbjct 656 ATAGTATTATAGGGCCTGTGAAGGCTAGAGCATTGTACGGACGTATACTGACTAAGCTGG 715 Query 102368 CCAACTCGAATTG 102380 | | ||| || || Sbjct 716 CTATCTCAAACTG 728 >seq9616 Length=845 Score = 170 bits (188), Expect = 2e-37 Identities = 351/527 (67%), Gaps = 6/527 (1%) Strand=Plus/Minus Query 103175 GCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGACCA 103234 || || || || ||||||||||| || || | ||| ||||| ||||||||||| || | Sbjct 549 GCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 490 Query 103235 GCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACC--CTGACCATCAAGGATGG 103292 || | || || | ||| ||||| ||||| | | | |||| |||| || | | | Sbjct 489 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAG--TCTACAAGTG 432 Query 103293 ACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTGA 103352 | | ||||||||| | || || | ||| || ||||| || || || || | ||||| Sbjct 431 ATTCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGGTGA 372 Query 103353 ACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTGA 103412 |||| ||||| | |||||| |||||||| | Sbjct 371 ACCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGTTAA 312 Query 103413 ATGATGC-GTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTAT 103471 | | | | ||| ||||| || | | ||| ||||| ||||| || ||| ||| | ||| Sbjct 311 A-GCTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATAT 253 Query 103472 GTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCA 103531 ||||| |||| |||||||| | || || | || | || | || | || ||||| Sbjct 252 GTCTCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCT 193 Query 103532 CGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAAG 103591 || || || || || || | || || |||||||||||||| || || || ||||| Sbjct 192 GCAAGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCGAAA 133 Query 103592 ACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAAG 103651 || | || || || | |||||||| || ||||| | |||| | ||||| |||||||| Sbjct 132 ACAGCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGGAAT 73 Query 103652 ACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATC 103698 || | ||| ||||||||||||| |||||| | |||||| |||| Sbjct 72 ACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATC 26 >seq15666 Length=534 Score = 127 bits (140), Expect = 3e-24 Identities = 207/297 (70%), Gaps = 1/297 (0%) Strand=Plus/Minus Query 103403 GAGTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACG 103462 |||||||| || |||| ||||| || | ||| ||||| ||||| || ||| Sbjct 318 GAGTTGTTAAAGCTACCGTACTGGAATATTGGTCTACCAAAGTATCCATGTGCTGCTGAT 259 Query 103463 ATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCA 103522 ||| | |||||||| ||||| ||| | | | || || | || | || | || | || Sbjct 258 ATGCTATATGTCTCATCCTCCTGTTCACATATATAGCCTGAATTGAGTGAGTTAGATCCA 199 Query 103523 GTCGTCTCACGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAA 103582 ||||| || || || || || || | || || |||||||||||||| || || Sbjct 198 AGTGTCTCTGCAAGTAGAGATGAAGTGACCAATGATCCATGCATAGCACTGAATAGAGAT 139 Query 103583 CCACCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCG 103642 || || || || | || || || | |||||||| |||||||| | |||||| ||||| Sbjct 138 CCTCCAAAAACAGCTGCTACTCCTAATATGTGGAATGGGTGCATTAAAATGTTGTGTTCT 79 Query 103643 GCTTGGAAGACCAGCAT-GTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATC 103698 |||||||| || | ||| ||||||||||||| |||||| | |||||| |||| Sbjct 78 GCTTGGAATACTAACATAAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATC 22 >seq14149 Length=608 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 74130 GTGGAGAATAGGAGACTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTACCAGC 74189 |||||| |||||| ||||||||||||| ||||| |||||| |||||||||| ||||| Sbjct 411 GTGGAGCCTAGGAGGATCGAACTCCTGACCTCCTGAATGCAAATCAGGCGCTCTCCCAGC 352 Query 74190 TGAGCTAATTCCCC 74203 |||||||| |||| Sbjct 351 TGAGCTAAGGCCCC 338 >seq6053 Length=1168 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 74130 GTGGAGAATAGGAGACTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTACCAGC 74189 |||||| |||||| ||||||||||||| ||||| |||||| |||||||||| ||||| Sbjct 866 GTGGAGCCTAGGAGGATCGAACTCCTGACCTCCTGAATGCAAATCAGGCGCTCTCCCAGC 925 Query 74190 TGAGCTAATTCCCC 74203 |||||||| |||| Sbjct 926 TGAGCTAAGGCCCC 939 >seq1552 Length=3150 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 74130 GTGGAGAATAGGAGACTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTACCAGC 74189 |||||| |||||| ||||||||||||| ||||| |||||| |||||||||| ||||| Sbjct 2836 GTGGAGCCTAGGAGGATCGAACTCCTGACCTCCTGAATGCAAATCAGGCGCTCTCCCAGC 2895 Query 74190 TGAGCTAATTCCCC 74203 |||||||| |||| Sbjct 2896 TGAGCTAAGGCCCC 2909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633382328063160