Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq9616 197 4e-46 seq14097 89.7 2e-13 >seq9616 Length=845 Score = 197 bits (218), Expect = 4e-46 Identities = 360/527 (68%), Gaps = 0/527 (0%) Strand=Plus/Minus Query 21469 ATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGT 21528 |||| || || || |||||||||||||| |||| ||||||||| || || | || |||| Sbjct 551 ATGCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGT 492 Query 21529 TGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAG 21588 || | ||||| ||||| ||||| ||||| || | || || || | ||| || | Sbjct 491 CTGCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTG 432 Query 21589 ATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAA 21648 ||| ||| ||||| | |||||| ||||| |||||||| ||||| || || || | | | Sbjct 431 ATTCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGGTGA 372 Query 21649 ACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAA 21708 |||| ||||||| || ||||| || || || ||||| || | || | || || |||| Sbjct 371 ACCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGTTAA 312 Query 21709 AGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAG 21768 ||||| || ||||| || || | |||||| || || || || || || | || | Sbjct 311 AGCTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATG 252 Query 21769 TCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCAC 21828 |||| |||| || || || | || || | || |||| | || ||||| Sbjct 251 TCTCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCTG 192 Query 21829 GAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATA 21888 || || || || || |||| || ||||||||| ||| | | || || || | Sbjct 191 CAAGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCGAAAA 132 Query 21889 CGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACA 21948 | | || || || | ||||| || |||||||| | ||| |||| || || ||||| | Sbjct 131 CAGCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGGAATA 72 Query 21949 CCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCA 21995 | | ||| |||||||||| || || || | |||||| ||||| Sbjct 71 CTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATCA 25 >seq14097 Length=611 Score = 89.7 bits (98), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 22206 GCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCT 22265 |||||||| | ||| || ||||| | ||| || |||||| || || | || |||||| Sbjct 217 GCTTCCCATACTGGATAAAAGTGAACTCCTATAGCATTAGAACTTGGTATTACTGCTCCT 158 Query 22266 GATAT--GATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGA 22323 | ||| ||||||||||||||| | ||| || || || ||||||| |||| |||| | Sbjct 157 GTTATTAGATGTTGTTACCATATAGGAGGCTTCCTGCTACAGGTTCTCTGATTACATCTA 98 Query 22324 TGTCAACAGGTGGTGC 22339 |||| || || ||||| Sbjct 97 TGTCTACTGGAGGTGC 82 Score = 89.7 bits (98), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 22206 GCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCT 22265 |||||||| | ||| || ||||| | ||| || |||||| || || | || |||||| Sbjct 563 GCTTCCCATACTGGATAAAAGTGAACTCCTATAGCATTAGAACTTGGTATTACTGCTCCT 504 Query 22266 GATAT--GATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGA 22323 | ||| ||||||||||||||| | ||| || || || ||||||| |||| |||| | Sbjct 503 GTTATTAGATGTTGTTACCATATAGGAGGCTTCCTGCTACAGGTTCTCTGATTACATCTA 444 Query 22324 TGTCAACAGGTGGTGC 22339 |||| || || ||||| Sbjct 443 TGTCTACTGGAGGTGC 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146179218681060