Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq8042 271 1e-67 seq9616 215 7e-51 seq15666 170 3e-37 seq2399 152 7e-32 seq10300 150 2e-31 >seq8042 Length=962 Score = 271 bits (300), Expect = 1e-67 Identities = 607/903 (67%), Gaps = 9/903 (1%) Strand=Plus/Plus Query 23397 TTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTTGGTCAATAGTC 23456 || ||||||||||| | ||||||| | | ||||| || || ||||| || | | | Sbjct 65 TTGCCTCTTGGAAGTACTTCCTCAGGGAATTGGAAGTTCTCATGAGGTTGTTCT-TGGAC 123 Query 23457 ATC-ATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATA 23515 | |||||| ||||| || | || | | || || || || ||||| |||||| | Sbjct 124 TGCCATCCATAAACGGATACCTTCATTAAGTAGTATGTTCTTAGTATAGAATGTCTCAAA 183 Query 23516 CGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAG 23575 | || || ||||| | ||| ||| | ||| ||||| || | ||| || | Sbjct 184 CTCTGGGTCCTCTGCAGCCTTTA-CTCCTGAGATATAAAGTCATATGCTCTAAGGTTGAA 242 Query 23576 AGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACAT 23635 || || || || || || ||||||||| ||| | || || || || || | | Sbjct 243 TGCTAGTCCTATTATTCCTATAGAAGAGGTCCACATTCCTGCTACTGGTACTAATAGTAG 302 Query 23636 AAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACG 23695 |||||||| | ||| | ||||||| ||| || || |||| | ||| ||||| || | Sbjct 303 GAAGAAGTGAAGCCATCTCTTATTGGAAAATGCTACTCCGAGTACTTGAGACCAGAATCT 362 Query 23696 ATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGT 23755 ||| ||||| | ||| || || |||||||| || || | | ||| | | | || || Sbjct 363 ATTAGCTGTTAGCATAGAGTAAGTCTCCTCAGGTTGCGTTGGAGAGAATGATCTGAAGGT 422 Query 23756 GTTTGCCTG-TTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAG 23814 | || | || ||||||| ||| | || || | || || | ||||| ||||| | Sbjct 423 -TGTGTAAGCTTGACCATCTTGATATATAGTGTTAACTACTGTGGCACCATGTATAGCTG 481 Query 23815 AGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCC 23874 | | ||| ||| |||||| || || || | ||||||||||||||| ||||| || |||| Sbjct 482 ATAAAAGAGCTGCTCCCAAGATTCCTGCTATTCCCATCATATGGAATGGGTTTAGAGTCC 541 Query 23875 AGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCG 23934 | || |||||||| || ||||| || ||||||||||| || || ||||| || | || | Sbjct 542 AATTGTGAAAGCCTTGTAGGAATAGGAGGAACCTGAAGATGGCTGCAACTCCATAGCTAG 601 Query 23935 GCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAG 23994 | |||||||||||||| || || || ||||| || |||| ||| || || | | ||| Sbjct 602 GTGCAAAGAACCAAGAGGATTGACCTAAAGGGTAAATGACGAACACTGATATGTATAGTA 661 Query 23995 CAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGACGTGCCAGTT 24054 ||||| || | || || | |||||||| ||||| || | | || | || | | Sbjct 662 TTATAGGGCCTGTGAAGGCTAGAGCATTGTACGGACGTATACTGACTAAGCTGGCTATCT 721 Query 24055 CAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACC 24114 ||||||| | ||| ||| ||||||| ||||||| ||| | || || |||| || Sbjct 722 CAAACTGCCTTAAACAAAAGCCTATAACTGCAAAGATTGAGTGAAAAGTAATGAAGGTCC 781 Query 24115 --AAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCCCAAAG 24172 |||| | | | || || | | ||| | ||||| | || || ||||| | Sbjct 782 ATAAAGAGCCCATAAGTG--TTCATCTTGTAAAATAACCTTGTGCTTCTGGTCCCCACAA 839 Query 24173 TAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTAAGAAAGTT 24232 ||| || |||||||| ||||| | ||| || || || ||||| || | |||||| Sbjct 840 TAGTAGTAGAGAATGTCCCATGCTATTAGCTGGTGTGCTAACTGCTGCTGTTAAAAAGTT 899 Query 24233 AGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACAAAAGCTGT 24292 | || || | || || || || | ||||| || |||||| || ||||| | ||| Sbjct 900 ACATCCTTCTAAGTATGAGCTTGCCAAACCATGTGTTAGCCAACTTGTGACAAATGTTGT 959 Query 24293 GCC 24295 ||| Sbjct 960 GCC 962 >seq9616 Length=845 Score = 215 bits (238), Expect = 7e-51 Identities = 373/542 (69%), Gaps = 0/542 (0%) Strand=Plus/Minus Query 26734 GCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCA 26793 || ||||| | ||| || || || || ||||| || || || || || | || || | Sbjct 549 GCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 490 Query 26794 GCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGAC 26853 || | || || | ||| ||||| ||||| | | | |||| | ||| || | | || Sbjct 489 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGAT 430 Query 26854 TGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAAC 26913 | |||||||| | ||| || | || |||||||| || ||||| || || | ||||||| Sbjct 429 TCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGGTGAAC 370 Query 26914 CAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAAT 26973 || || || | || |||||||| || ||||||||||| | | | ||||||||| || Sbjct 369 CATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGTTAAAG 310 Query 26974 GAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTC 27033 | || ||||| || | | ||| ||||| ||||||||||| ||| | || ||| Sbjct 309 CTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTC 250 Query 27034 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGG 27093 || || | || ||||| |||| || | || |||| | || | || ||||| Sbjct 249 TCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCTGCA 190 Query 27094 ACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACC 27153 | || || || || |||| ||| ||||||||| ||| |||||||| ||||| || Sbjct 189 AGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCGAAAACA 130 Query 27154 CCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACA 27213 | || || || | |||||||| || ||||| | || |||||||||| |||||||| Sbjct 129 GCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGGAATACT 70 Query 27214 AGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGA 27273 | ||| |||| || || ||| ||||| || |||||| |||| |||| ||||| Sbjct 69 AACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATCACTGAAACTTCCTTGT 10 Query 27274 CC 27275 || Sbjct 9 CC 8 >seq15666 Length=534 Score = 170 bits (188), Expect = 3e-37 Identities = 278/399 (70%), Gaps = 1/399 (0%) Strand=Plus/Minus Query 26878 TTGAAAGCCATCGTGGATACACCAAGTGCGGTGAACCAGATGCCAACAACGGGCCATGCA 26937 || ||||||||||| ||| | || || | ||||||||| || || | || |||||||| Sbjct 402 TTAAAAGCCATCGTAGATGCTCCTAGAGAGGTGAACCATATACCTATTACTGGCCATGCT 343 Query 26938 GCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGGAAGATCAAACGA 26997 || ||||||||||| | | | ||||||||| || | | || ||||| || | | Sbjct 342 GCTAGGAAGAAGTGTAGGCTTCTTGAGTTGTTAAAGCTACCGTACTGGAATATTGGTCTA 283 Query 26998 CCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAA 27057 || ||||| ||||||||||| ||| | || ||||| || || || | | |||| Sbjct 282 CCAAAGTATCCATGTGCTGCTGATATGCTATATGTCTCATCCTCCTGTTCACATATATAG 223 Query 27058 CCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGGACGAGTGAAGATGTAACCAGACTT 27117 || | || |||| | || | || ||||| | || || || || |||| | Sbjct 222 CCTGAATTGAGTGAGTTAGATCCAAGTGTCTCTGCAAGTAGAGATGAAGTGACCAATGAT 163 Query 27118 CCGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAAC 27177 || ||||||||| ||| |||||||| || || || | || || || | |||||||| Sbjct 162 CCATGCATAGCACTGAATAGAGATCCTCCAAAAACAGCTGCTACTCCTAATATGTGGAAT 103 Query 27178 GGGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCAT-GTAGTTAAAAGTACCAGA 27236 |||||||| | || ||||||||||| |||||||| | ||| |||| || || ||| Sbjct 102 GGGTGCATTAAAATGTTGTGTTCTGCTTGGAATACTAACATAAAAGTTGAAGGTTCCACT 43 Query 27237 GATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGACC 27275 ||||| || |||||| |||| |||| ||||| || Sbjct 42 AATACCTAGTGGCATACCATCACTGAAACTTCCTTGTCC 4 >seq2399 Length=2249 Score = 152 bits (168), Expect = 7e-32 Identities = 387/585 (66%), Gaps = 8/585 (1%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || ||||| | || ||||||| || | || || || | || ||||||| | || Sbjct 477 CCGGTGGCCAGCACGTAATCATCGGGCTTGTCCTGCTGGACGATACGCCACATACCTTCC 536 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 |||||||| | ||||| ||||| || || | ||| ||||| || ||| ||||| Sbjct 537 ACATAATCGCGTGCATGCCCCCAATCGCGCTTCGAATCTAGATTACCAAGA----AACAG 592 Query 47908 TCTTG-CT--TACCTTCAGAGA-TTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAA 47963 | ||| || | || || || |||| | || | || || || || |||||||| Sbjct 593 TTTTGACTGGTGCCCCAAGTGAATTGCGGCAACCGCGCGAGTGATTTTCCGTGTTACAAA 652 Query 47964 AGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCC 48023 ||||| || || |||| ||||| || || | ||| || || | |||| || || Sbjct 653 CGTTTCGCCTCGCGTTGGGCCCTCATGGTTGAATAAAATGCCGTTAGAAGCATGGATCCC 712 Query 48024 GTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGG 48083 ||||| ||| |||||||| |||||| || |||| || || | || || || Sbjct 713 GTATGCTTCGCGATAGTTAACGGTGATCCAGAACGCATATGCCTTGGCTGCGCCGTACGG 772 Query 48084 AGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAG 48143 | | |||||| || || || || ||||| || || || | || | || || || Sbjct 773 ACTCCTTGGATAAAATGGCGTCAATTCGGTCTGGGGCGTTTCGCGAACATCGCCGTAGAG 832 Query 48144 TTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGC 48203 ||| ||| || ||||| || | ||| || | || | | ||| | || | ||| Sbjct 833 TTCGGAGGTTGAGGCTTGGTAAAAACGTACGCGGCTCTCTAAATTAAGGATCCGAATTGC 892 Query 48204 CTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAA 48263 || ||||| || || || || |||||||||| | ||||||||||||| | ||||| Sbjct 893 TTCCAGCACCCTTAGTGTTCCGATGGCATCTGAATTTGCAGTATACTCGGGTGTTTCAAA 952 Query 48264 CGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTGCTG 48323 ||||| |||||||| ||||| | ||||| || || |||||||| || | || Sbjct 953 GCTTACCTTAACATGACTTTGTGCAGCGAGATTGTATATTTCATCTGGCTGCGTTTCTTG 1012 Query 48324 AATAACCCTCACTAAATTTGTAGAGTCTGTTAAGTCTCCATAATG 48368 || || | | || |||||| ||||| || | ||| ||||| || Sbjct 1013 AACAAGTCGAATTATATTTGTTGAGTCGGTCATGTCACCATAGTG 1057 >seq10300 Length=803 Score = 150 bits (166), Expect = 2e-31 Identities = 282/413 (68%), Gaps = 1/413 (0%) Strand=Plus/Plus Query 26734 GCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCA 26793 || ||||| | ||| || | || || ||||| || || || || || | || || | Sbjct 297 GCTAGATCTAGTGGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 356 Query 26794 GCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGAC 26853 || | || || | ||| ||||| ||||| | | | |||| | ||| || | | || Sbjct 357 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGAT 416 Query 26854 TGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAAC 26913 | ||||||||| | || || | || |||| ||| || ||||| || || | ||||||| Sbjct 417 TCATTGAAGTTCAGGCCATTTAAGTTAAAAGTCATTGTAGATACTCCTAGAGAGGTGAAC 476 Query 26914 CAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAAT 26973 || || || | || |||||||| || ||||||||||| | | ||||||||| || Sbjct 477 CATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTAGACTTCTTGAGTTGTTAAAG 536 Query 26974 GAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTC 27033 | | |||||||| || | | ||| ||||| ||||||||||| ||| | || ||| Sbjct 537 CTACCGTATTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTC 596 Query 27034 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGG 27093 || || || || ||||| |||| || | || |||| | || | || ||||| || Sbjct 597 TCATCCTCCTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTC-CGC 655 Query 27094 ACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACC 27146 | | || || || |||| ||| ||||||||| ||| |||||||| || Sbjct 656 AAGTAGGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCC 708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665356501241640