Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq9616 318 7e-82 seq15666 259 6e-64 seq10300 205 1e-47 >seq9616 Length=845 Score = 318 bits (352), Expect = 7e-82 Identities = 389/528 (74%), Gaps = 2/528 (0%) Strand=Plus/Minus Query 7889 ATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGT 7948 |||||| |||| |||||||||||||||||| || |||||||| ||||||||||||| || Sbjct 551 ATGCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGT 492 Query 7949 TTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008 |||||| || | || ||| ||||||| ||| | | ||| | || |||| || Sbjct 491 CTGCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTG 432 Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTA 8068 ||| ||| ||||| | || || | |||||| |||||||| | | || | ||| || | Sbjct 431 ATTCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGGTGA 372 Query 8069 ACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAA 8128 |||| | || || ||||| ||| || ||||||||||| | ||||| |||||||| Sbjct 371 ACCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGTTAA 312 Query 8129 ACGATGCA-TACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAG 8187 | | | | |||||||| |||| |||||||||||||||||| || || || |||| Sbjct 311 A-GCTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATAT 253 Query 8188 GTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCT 8247 ||||| || | || || || |||| || | || | || | | || ||||||| Sbjct 252 GTCTCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCT 193 Query 8248 CTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAAC 8307 | |||||| || || || || || || |||||||||||||| || ||||| ||||| Sbjct 192 GCAAGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCGAAA 133 Query 8308 ATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAAT 8367 | | ||||||| ||| || ||||| |||||||| | |||| | || |||||||||||| Sbjct 132 ACAGCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGGAAT 73 Query 8368 ACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCA 8415 || ||||| ||||| || || ||| ||||||||| ||||| |||||| Sbjct 72 ACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATCA 25 >seq15666 Length=534 Score = 259 bits (286), Expect = 6e-64 Identities = 370/517 (72%), Gaps = 7/517 (1%) Strand=Plus/Minus Query 7902 TGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTTGCTCTGTTTAA 7961 |||||||| ||||||||| || |||||||| ||||||||||||| || |||||| || | Sbjct 533 TGGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCTGCTCTATTAAG 474 Query 7962 TACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGATTGGTTAAAG-- 8019 || ||| ||||||| ||| | | | | | || |||| ||||| || | | Sbjct 473 TATGTCGGCCCATGTGTTAATTAGATGATCTTCTGAGTCTACAAGTGATTCATTGAGGGC 414 Query 8020 TTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACCAAACACAT 8079 | | || ||||| ||||| ||||| || | || | ||| || ||||| | || | Sbjct 413 TCACAT---TTAAG-TTAAAAGCCATCGTAGATGCTCCTAGAGAGGTGAACCATATACCT 358 Query 8080 ACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAACGATGCATAC 8139 | ||||| ||| || ||||||||||| || ||||| ||||||||| | ||| Sbjct 357 ATTACTGGCCATGCTGCTAGGAAGAAGTGTAGGCTTCTTGAGTTGTTAAAGCTACCGTAC 298 Query 8140 TGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCTTCTTCT 8199 ||||| ||| |||||||||||||||||| || || || |||| ||||| || || Sbjct 297 TGGAATATTGGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTCTCATCCTCC 238 Query 8200 TGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTGATTAGAGAA 8259 || || | |||| || | || | || | | || ||||||| | |||||| Sbjct 237 TGTTCACATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCTGCAAGTAGAGAT 178 Query 8260 GATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATACCTGCTACC 8319 || || || || || || |||||||||||||| || ||||| || || | | ||||||| Sbjct 177 GAAGTGACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCAAAAACAGCTGCTACT 118 Query 8320 CCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACAT-GAA 8378 ||| || ||||| || ||||| | |||||| || |||||||||||||| ||||| || Sbjct 117 CCTAATATGTGGAATGGGTGCATTAAAATGTTGTGTTCTGCTTGGAATACTAACATAAAA 58 Query 8379 GTTAAACGTACCAGAAATACCTAGAGGCATTCCATCA 8415 ||| || || ||| ||||||||| ||||| |||||| Sbjct 57 GTTGAAGGTTCCACTAATACCTAGTGGCATACCATCA 21 >seq10300 Length=803 Score = 205 bits (226), Expect = 1e-47 Identities = 295/415 (71%), Gaps = 1/415 (0%) Strand=Plus/Plus Query 7889 ATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGT 7948 |||||| |||| |||||||| ||||||||| || |||||||| ||||||||||||| || Sbjct 295 ATGCTAGATCTAGTGGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGT 354 Query 7949 TTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008 |||||| || | || ||| ||||||| ||| | | ||| | || |||| || Sbjct 355 CTGCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTG 414 Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTA 8068 ||| || ||||| | || || | |||||| | |||||| | | || | ||| || | Sbjct 415 ATTCATTGAAGTTCAGGCCATTTAAGTTAAAAGTCATTGTAGATACTCCTAGAGAGGTGA 474 Query 8069 ACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAA 8128 |||| | || || ||||| ||| || ||||||||||| |||||||| |||||||| Sbjct 475 ACCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTAGACTTCTTGAGTTGTTAA 534 Query 8129 ACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGG 8188 | | || ||||| |||| |||||||||||||||||| || || || |||| | Sbjct 535 AGCTACCGTATTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATG 594 Query 8189 TCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTC 8248 |||| || || || || || |||| || | || | || | | || |||||| Sbjct 595 TCTCATCCTCCTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCCG 654 Query 8249 TGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACC 8303 | ||| || || || || || || || |||||||||||||| || ||||| || Sbjct 655 CAAGTAG-GATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCC 708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615734785612440