Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq8042 313 3e-80 seq9616 246 3e-60 seq15666 192 7e-44 seq10300 154 2e-32 seq14874 86.0 7e-12 >seq8042 Length=962 Score = 313 bits (346), Expect = 3e-80 Identities = 588/855 (69%), Gaps = 21/855 (2%) Strand=Plus/Minus Query 167185 AACTTTCTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTT 167244 |||||| | || || |||||||| || ||||| || ||||| |||||| |||| || Sbjct 899 AACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTACTA 840 Query 167245 CTATGGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCT-- 167302 | ||||| || ||| | ||||| |||| || || |||| ||| |||| Sbjct 839 TTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAAC---ACTTATGGG-CTCTTT 784 Query 167303 --GGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTC-GACAGT 167359 || | || | | | ||| | |||||| | || || || || || | |||| Sbjct 783 ATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGGCAGT 725 Query 167360 TTGAACTTGCTCGCCTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTA 167419 |||| | || || | | |||| ||||| ||||||||| | || ||| | || |||| Sbjct 724 TTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCCCTA 665 Query 167420 TTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTG 167479 | | | | | || ||| | | || || | |||||| | |||||||||| Sbjct 664 TAATACTATACATATCAGTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTCTTTG 605 Query 167480 CCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACA 167539 | || || ||||| || ||||||||| | |||||||| ||||| ||||| || |||| Sbjct 604 CACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTTCACA 545 Query 167540 ACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGC 167599 | ||||| || || ||||| ||||||||||| ||||||| ||| |||| | || | Sbjct 544 ATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCTCTTT 485 Query 167600 TTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAA 167659 | || || || ||||||| ||||||| || ||| | ||| |||||||| ||||| Sbjct 484 TATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGT---CAAGCTT 428 Query 167660 AC---ACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAG 167716 || || || | ||||| | | || || || |||||||| || ||| | |||| Sbjct 427 ACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACAG 368 Query 167717 CAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATT 167776 | || ||||||||||||| | |||| | || || ||| || | |||||||| | Sbjct 367 CTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACT 308 Query 167777 TCTTTATGTTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTC 167836 |||| | |||| || || || ||| | ||||| || || || || || || || | Sbjct 307 TCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGAC 248 Query 167837 TGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATC 167896 | || | || ||| | || || || || | ||||| ||| | | || || ||||| | Sbjct 247 TAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAGGACC 189 Query 167897 CAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGT 167956 |||||||||| || ||||||||||| ||||| || || ||||||||| | || |||| Sbjct 188 CAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTATGGA 129 Query 167957 TAGCA--CCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACG 168014 | ||| || | || ||||||||||||||||| ||||| |||||||| || ||| | Sbjct 128 TGGCAGTCCAA--GAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAG 71 Query 168015 AGGCAACGCACTATA 168029 ||||||| ||||||| Sbjct 70 AGGCAACTCACTATA 56 >seq9616 Length=845 Score = 246 bits (272), Expect = 3e-60 Identities = 382/544 (70%), Gaps = 4/544 (1%) Strand=Plus/Plus Query 166210 GGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATG 166269 || ||||| |||||| ||||| |||||||| || || ||||| ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 166270 TTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCT 166329 || || |||||||| || |||| ||| | |||||||| ||||| || | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 166330 GGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTC 166389 | || || || || | | || ||||||||||| ||| ||||| ||||| ||||| Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 166390 GTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAA 166449 || |||||| || | | | || | || | || || | |||||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 166450 GAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCT 166509 || ||||| | ||| ||| || ||||| ||||| ||| | | || ||||| ||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 166510 TCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATC 166569 || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 166570 TGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAAC 166629 ||||||||| | || || || || || ||||| || ||| | || ||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 166630 CAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACC 166687 | || | | || |||| |||| | | | ||||| ||||| || | ||||| Sbjct 428 GAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 166688 GCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACC 166747 | || | || ||||||||||| ||||||||| | || |||||||||||||| || || | Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATC 545 Query 166748 TCGC 166751 | || Sbjct 546 TAGC 549 >seq15666 Length=534 Score = 192 bits (212), Expect = 7e-44 Identities = 365/533 (68%), Gaps = 7/533 (1%) Strand=Plus/Plus Query 166210 GGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTAC-AT 166268 || ||||| |||||| ||||| |||||||| || || ||||| ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 166269 GTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGC 166328 ||| || |||||||| || ||||| ||| | ||||| || ||||| || | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 166329 TGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCT 166388 | || ||||| || | | || ||||||||||| ||| ||||| ||||| ||||| Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 166389 CGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGA 166448 || |||||| || | | | || | || | || || | | | ||| || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 166449 AGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGC 166508 || ||||| | ||| ||| || ||||| ||||| ||| | || ||||| |||| Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 166509 TTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCAT 166568 | || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 166569 CTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAA 166628 ||||||||| | || || | || |||||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 166629 CCAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAAC 166686 | || | | || |||| | || | | | ||||| ||||| || | ||||| Sbjct 422 TGAATCACTTGTAGA--CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 166687 CGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCC 166739 | || | || ||||||||||| ||||||||| | || |||||| ||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 154 bits (170), Expect = 2e-32 Identities = 278/403 (69%), Gaps = 5/403 (1%) Strand=Plus/Minus Query 166351 TTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACC 166410 || ||||||||||| ||| ||||| ||||| || || || ||||| || | | Sbjct 696 TTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAGACACTTGGATCT 638 Query 166411 GAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCC 166470 | || | || | || || | |||||||| || || || ||||| | ||| ||| Sbjct 637 AACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATATAGCATATCAGCA 578 Query 166471 GCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCC 166530 || ||||| ||||| ||| | | || |||||||||| | || |||||||| | Sbjct 577 GCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAACAACTCAAGAAGT 518 Query 166531 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTC 166590 | ||||||||||| || |||||||| || | || || ||||||||| | || || || Sbjct 517 CTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTA 458 Query 166591 TCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 166650 || || ||| | || ||| | || || | |||||||| | || | | || |||| Sbjct 457 TCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTTGTAGA--CTCAG 400 Query 166651 --GGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAG 166708 |||| | | | ||||| ||||| || | ||||| | || | || |||||||||| Sbjct 399 AAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAG 340 Query 166709 TTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGC 166751 | ||||||||| | || |||||| ||||||| || || || || Sbjct 339 TAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq14874 Length=573 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 18007 tCGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 18066 |||||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 501 TCGGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGCGGTTCGA 442 Query 18067 GTCCGCTATTCTCCA 18081 |||||| ||||| Sbjct 441 TCCCGCTAGGCTCCA 427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561131702398800