Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq339 123 3e-23 seq6198 118 1e-21 seq5801 107 3e-18 seq4708 107 3e-18 seq3647 87.8 2e-12 >seq339 Length=9696 Score = 123 bits (136), Expect = 3e-23 Identities = 262/380 (69%), Gaps = 16/380 (4%) Strand=Plus/Plus Query 198579 CCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTT 198638 || ||||||||||| || || || || || || || || || ||| ||| ||| || || Sbjct 2991 CCAGGTACTGGTAAGACGCTGCTGGCGCGGGCCATTGCAGGCGAAGCGAATGTGCCGTT- 3049 Query 198639 CTTCA-GTGCTCCGCGGC-GAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCG 198696 ||||| | |||| | || ||| | || ||||| || || || ||||| | |||| Sbjct 3050 CTTCACGATTTCCGGTTCTGACTTTGTT-GAAATGTTTGTAGGCGTCGGTGCGAGCCGCG 3108 Query 198697 TCCGGGAACTCTTTGAGCAAGC-ACGTGAAAATCAACCATGTATCATCTTCATTGATGAG 198755 | || || | || ||||| || | | || ||| || || ||||||||||| |||||| Sbjct 3109 TGCGCGACATGTTCGAGCAGGCGAAGAAGAACTCA-CCTTGCATCATCTTCATCGATGAG 3167 Query 198756 ATTGACGCTGTTGGTAAGAAGCGTGGTG--GAACTACTACACCTGGTAATGATGAGCGTG 198813 ||||| || || ||| | ||||||| | ||| | |||||||||||||| | Sbjct 3168 ATTGATGCGGTCGGTCGCCATCGTGGTGCCGGACT--TGGCGGGGGTAATGATGAGCGCG 3225 Query 198814 AGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTA 198870 | ||||| | |||||| | || ||||||||||| ||||| |||||| | | | Sbjct 3226 AACAGACACTCAACCAGTTGCTGGTGGAGATGGATGGCTTTGAGCCCAATGAAA---GCA 3282 Query 198871 TCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCG 198930 || | ||||||| || || || | || | || || || ||||| ||||||| Sbjct 3283 TCATCCTGATTGCAGCGACCAACCGTCCGGACGTTCTGGACCCGGCGCTGCTGCGTCCCG 3342 Query 198931 GTCGATTCGACCGTAAGATT 198950 |||| || |||||| || || Sbjct 3343 GTCGTTTTGACCGTCAGGTT 3362 >seq6198 Length=1149 Score = 118 bits (130), Expect = 1e-21 Identities = 226/322 (70%), Gaps = 16/322 (5%) Strand=Plus/Minus Query 198579 CCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTT 198638 |||||||| ||||||||| | | ||| ||||| || || ||| ||| || || ||| Sbjct 1095 CCGGGTACCGGTAAAACCTTGTTGGCTAAGGCTATTGCCGGCGAAGCGAAAGTACC-TTT 1037 Query 198639 CTTCAGTG-CTCCGCGGC-GAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCG 198696 ||| | | ||| | | || ||| | || ||||| |||||||||||||| ||| | Sbjct 1036 CTTTACTATCTCTGGCTCTGACTTTGTT-GAAATGTTTGTTGGTGTTGGTGCCTCGCGTG 978 Query 198697 TCCGGGAACTCTTTGAGCAAGCACGTGAAAATCA--ACCATGTATCATCTTCATTGATGA 198754 | || || | ||||||||||| |||| || ||| |||||||||||||| ||||| Sbjct 977 TTCGTGACATGTTTGAGCAAGCCAA--AAAAGCATCACCCTGTATCATCTTCATCGATGA 920 Query 198755 GATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACAC-CTGGTAATGATGAGCGTG 198813 ||||| || || ||| ||||||||| | || | ||| | |||||||| | Sbjct 919 AATTGATGCGGTAGGTCGCCAGCGTGGTGCCGGT-TTAGGCGGTGGCCACGATGAGCGCG 861 Query 198814 AGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTA 198870 |||| || | |||||| | || || |||||||| ||||| |||||| |||| Sbjct 860 AGCAAACCTTAAACCAGATGCTGGTAGAAATGGATGGCTTTGATGGCAATGA---AGGTA 804 Query 198871 TCGTGGTGATTGCTGCTACAAA 198892 || | || |||||||| || || Sbjct 803 TCATTGTTATTGCTGCCACCAA 782 >seq5801 Length=1198 Score = 107 bits (118), Expect = 3e-18 Identities = 197/281 (70%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 198579 CCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTT 198638 |||||||| ||||||||||| || || || || |||||||| || || ||||||| || Sbjct 103 CCGGGTACGGGTAAAACCCTGCTGGCGCGCGCCATCGCGGGCGAGGCGGGTGTCCCATTC 162 Query 198639 CTTCAGTGCTCCGCGGC-GAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGT 198697 || ||| | | | || ||| | || |||||||| ||||| ||||| | || || Sbjct 163 TTTACCATCTCGGGGTCTGACTTT-GTTGAAATGTTCGTGGGTGTCGGTGCCAGCCGTGT 221 Query 198698 CCGGGAACTCTTTGAGCAAGCACGTGAA-AATCAACCATGTATCATCTTCATTGATGAGA 198756 || || | ||||| || || | ||| ||| ||||||||| | || || || || | Sbjct 222 GCGTGACATGTTTGAACAGGC-CAAGAAGAATGCACCATGTATTGTGTTTATCGACGAAA 280 Query 198757 TTGACGCTGTTGGTAAGAAGCGTGGTG-GAACTACTACACCTGGTAATGATGAGCGTGAG 198815 | || || || ||| | ||||||| ||| | | ||||| || ||||| || Sbjct 281 TCGATGCGGTCGGTCGTCACCGTGGTGCTGGCTATGGCGGC-GGTAACGACGAGCGCGAA 339 Query 198816 CAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA 198856 || ||| | |||||||| | |||||||||||||||||| Sbjct 340 CAAACGCTCAACCAGCTGTTGGTTGAGATGGATGGTTTTGA 380 >seq4708 Length=1380 Score = 107 bits (118), Expect = 3e-18 Identities = 201/291 (69%), Gaps = 11/291 (4%) Strand=Plus/Plus Query 198579 CCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTT 198638 || || || |||||||||||||| || ||||| || || |||||| | | || ||| || Sbjct 357 CCAGGAACAGGTAAAACCCTTCTCGCCCGTGCGATTGCTGGTGAAGCAGGCGT-CCCATT 415 Query 198639 CTTCA-GTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGT 198697 ||||| || | | | ||| | |||||||| || ||||| || || | || || Sbjct 416 CTTCACAATTTCAGGGTCTGATTTTGTAGAGATGTTTGTCGGTGTAGGCGCCAGCCGTGT 475 Query 198698 CCGGGAACTCTTTGAGCAAGC---ACGTGAAAATCAACCATGTATCATCTTCATTGATGA 198754 ||| || | || |||||||| |||| ||| || ||||||||||| ||||| || Sbjct 476 CCGCGACATGTTCGAGCAAGCCAAACGT---AATGCGCCTTGTATCATCTTTATTGACGA 532 Query 198755 GATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGA 198814 |||||||| || || || || | | | |||||||||||||| || Sbjct 533 AATTGACGCGGTCGGCCGTTCACGCGGCGCTGGTCTTGGCGGCGGTAATGATGAGCGCGA 592 Query 198815 GCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA---CAATGA 198862 ||| || | |||||||| | |||||||||||||||||| |||||| Sbjct 593 GCAAACATTGAACCAGCTATTGGTTGAGATGGATGGTTTTGAAGCCAATGA 643 >seq3647 Length=1650 Score = 87.8 bits (96), Expect = 2e-12 Identities = 184/271 (68%), Gaps = 10/271 (4%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || ||||||||||| |||| || | || || ||||| ||||| ||||| | || Sbjct 986 ACCGTACCTGCTTATTTCAACGACGCCCAGCGTCAGGCCACAAAAGACGCCGGCAAGATC 927 Query 195779 GCGGGTCTA-AACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || ||||| || || || | || ||||| |||||||| || ||||| | || || || Sbjct 926 GCCGGTCTCGAAGTG-CTGCGGATCATCAACGAACCAACGGCTGCTGCGCTGGCCTACGG 868 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATG-TATTGATCTTTGATCTCGGTGGTGGTA 195896 | ||||||| | | ||| | ||| | | ||| ||| || ||||| |||| Sbjct 867 TTTGGACAAAGA-------GCAGACACAAACCATCGCGGTCTATGACCTTGGTGGCGGTA 815 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 |||||||||| | |||| | || || | || | |||||||| || | || || Sbjct 814 CGTTTGATGTGACCATTCTGGAAATCGATGACGGCCTGTTCGAAGTCAAATCCACCAATG 755 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||||||| | ||||||||||| || || Sbjct 754 GTGATACTTTCTTGGGTGGTGAAGACTTTGA 724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657726082687440