Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq9616 197 4e-46 seq14097 89.7 2e-13 >seq9616 Length=845 Score = 197 bits (218), Expect = 4e-46 Identities = 360/527 (68%), Gaps = 0/527 (0%) Strand=Plus/Plus Query 41692 TGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGA 41751 ||||| |||||| | || || || |||||||||| ||| | || ||||| || || Sbjct 25 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGA 84 Query 41752 GCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAG 41811 |||| ||| | |||||||| || ||||| | || || || | || || || || Sbjct 85 ACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATC 144 Query 41812 TTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGA 41871 | | ||| ||||||||| || |||| || || || || || ||||| || Sbjct 145 TCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGG 204 Query 41872 AGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGT 41931 | |||| || | || || | || || || |||| ||||| || | || Sbjct 205 ATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATC 264 Query 41932 TGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCG 41991 || || || || || |||||| | || || ||||| || ||||||||| || || | Sbjct 265 AGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCAAG 324 Query 41992 TAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGG 42051 || | || ||||| || || || ||||| || ||||||| ||||| | | || || Sbjct 325 AAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGG 384 Query 42052 CGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGC 42111 || ||||| |||||||| ||||| |||||| | ||||| ||| |||| || ||| | Sbjct 385 AGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGACTC 444 Query 42112 TGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGA 42171 || || || | || ||||| ||||| ||||| ||||| | || |||| || | || Sbjct 445 AGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGA 504 Query 42172 GGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGCAT 42218 || ||||||||| |||| |||||||||||||| || || || |||| Sbjct 505 AGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGCAT 551 >seq14097 Length=611 Score = 89.7 bits (98), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 41348 GCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGT 41407 ||||| || || ||||| |||| |||| ||||||| || || || ||| | |||||| Sbjct 82 GCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGCCTCCTATATGGT 141 Query 41408 AACAACATC--ATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCT 41465 ||||||||| ||| ||||||| || | || || |||||| || ||| | ||||| | Sbjct 142 AACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAGGAGTTCACTTTT 201 Query 41466 ACCCAATTTGGGAAGC 41481 | ||| | |||||||| Sbjct 202 ATCCAGTATGGGAAGC 217 Score = 89.7 bits (98), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 41348 GCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGT 41407 ||||| || || ||||| |||| |||| ||||||| || || || ||| | |||||| Sbjct 428 GCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGCCTCCTATATGGT 487 Query 41408 AACAACATC--ATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCT 41465 ||||||||| ||| ||||||| || | || || |||||| || ||| | ||||| | Sbjct 488 AACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAGGAGTTCACTTTT 547 Query 41466 ACCCAATTTGGGAAGC 41481 | ||| | |||||||| Sbjct 548 ATCCAGTATGGGAAGC 563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146185617421208