Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq9616 208 2e-49 seq15666 152 1e-32 >seq9616 Length=845 Score = 208 bits (230), Expect = 2e-49 Identities = 376/540 (70%), Gaps = 16/540 (3%) Strand=Plus/Plus Query 42743 TTTCAG--ATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCA 42800 |||||| |||| ||||| || || ||| || || |||||||| ||||| || ||||| Sbjct 19 TTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCA 78 Query 42801 GGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGG 42860 || ||||| | |||| | |||||||| ||||| || | || || || | || || || Sbjct 79 AGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGG 138 Query 42861 TGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAAC 42920 || || | ||| ||||||||||| | || || || ||||| | || || Sbjct 139 AGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGAC 198 Query 42921 GACTGAAAACGAAAGC-CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATA 42979 ||| | | || | | |||| ||||| | ||||| || |||| ||||| |||| Sbjct 199 -ACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATA 257 Query 42980 ACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCG-TTTAAT 43038 ||| ||||| ||||| |||||||| | || || ||||| || || | ||||| Sbjct 258 GCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTA-CAGTAGCTTTAAC 316 Query 43039 AA---TAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTC 43095 || || || | |||||||| || || || ||||| || | || || |||||| Sbjct 317 AACTCAAGAAGC---ATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTC 373 Query 43096 ACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCA 43155 || ||||| || || ||| ||||| |||||||| |||||| | ||||| ||| ||||| Sbjct 374 ACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCA 433 Query 43156 CTTGTTGATAATCAGAA--TCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCA 43213 ||||| | | |||||| |||| | || || ||||| || || | ||| | || Sbjct 434 CTTGT--AGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAG 491 Query 43214 ACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGCAT 43273 |||| || | || || ||||| ||| |||||||||| |||||||| || ||||| |||| Sbjct 492 ACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGCAT 551 >seq15666 Length=534 Score = 152 bits (168), Expect = 1e-32 Identities = 357/527 (68%), Gaps = 19/527 (4%) Strand=Plus/Plus Query 42743 TTTCAG--ATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTC-ATGTTGGTCTTCC 42799 |||||| |||| ||||| || || ||| || || |||||||| ||||| || |||| Sbjct 15 TTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCC 74 Query 42800 AGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTG 42859 | || ||||| |||||| | ||||| || ||||| || | || || || | || |||| Sbjct 75 AAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTG 134 Query 42860 GTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAA 42919 | || || | ||| ||||||||||| | ||||| || ||||| | || | Sbjct 135 GAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGA 194 Query 42920 CGACTGAAAACGAAAGC-CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTAT 42978 | ||| | | || | | |||| ||||| | | | || ||||| ||||| ||| Sbjct 195 C-ACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATAT 253 Query 42979 AACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCG-TTTAA 43037 | ||| ||||| ||||| |||||||| | | || ||||| || | || | ||||| Sbjct 254 AGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACG-GTAGCTTTAA 312 Query 43038 TAA---TAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTT 43094 || || || | |||||||| || || || ||||| || | || || ||||| Sbjct 313 CAACTCAAGAAGC---CTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTT 369 Query 43095 CACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATC 43154 ||| ||||| || | ||| ||||| |||||||| |||| | | | || |||| Sbjct 370 CACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATC 427 Query 43155 ACTTGTTGATAATCAGA--ATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCC 43212 |||||| | | ||||| ||||| | || || ||||| || || | ||| | || Sbjct 428 ACTTGT--AGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCA 485 Query 43213 AACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCC 43259 |||| || | || || ||||| ||| |||||||||| ||||||| Sbjct 486 GACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143504545299196