Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq9616 273 3e-68 seq15666 224 1e-53 seq10300 172 6e-38 seq15657 84.2 3e-11 >seq9616 Length=845 Score = 273 bits (302), Expect = 3e-68 Identities = 389/544 (72%), Gaps = 4/544 (1%) Strand=Plus/Plus Query 155410 GGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATG 155469 || ||||| |||| ||||| ||||| || ||||| ||| || || |||| |||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 155470 TTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCA 155529 || || |||||||||||||||| || | ||||| || |||||||| | ||||||||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 155530 GGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTA 155589 | ||| ||||| |||||||| ||| ||||||||| || |||||||| || || || ||| Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 155590 AT--CCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAG 155647 | | | || ||| || | | | || | || | || || | |||||||| | | Sbjct 188 CTTGCAGAGACACT-TGGATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGTAGG 245 Query 155648 AAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATG 155707 | || || |||| ||| || || ||||||||||| ||| | || || |||||||| Sbjct 246 ATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACA 305 Query 155708 CATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCA 155767 ||| |||||||||||||| | ||||||||||| || |||||||| || | | | Sbjct 306 GTAGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTA 365 Query 155768 TCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCA 155827 | ||| || || | || || || || ||||| || ||| | || ||| | ||||||| Sbjct 366 TATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCA 425 Query 155828 ACCAGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACC 155887 || | || | |||||| | ||| | | || |||||||| ||||| ||||| Sbjct 426 ACGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 155888 GCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACC 155947 | || | || ||||||||||||||||| ||| | || || ||||||||||| || || | Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATC 545 Query 155948 TTGC 155951 | || Sbjct 546 TAGC 549 >seq15666 Length=534 Score = 224 bits (248), Expect = 1e-53 Identities = 373/533 (70%), Gaps = 7/533 (1%) Strand=Plus/Plus Query 155410 GGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTAT-AT 155468 || ||||| |||| ||||| ||||| || ||||| ||| || || |||| | || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 155469 GTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGC 155528 ||| || ||||||||||||||||| || | |||||||| |||||||| | |||||||| Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 155529 AGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACT 155588 || ||| || || |||||||| ||| ||||||||| || |||||||| || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 155589 AAT--CCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAA 155646 | | | | || ||| || | | | || | || | || || | | | ||| || Sbjct 184 ACTTGCAGAGACACT-TGGATCTA-ACTCACTCAATTCAGGCTATATATGTGAACAGGAG 241 Query 155647 GAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTAT 155706 || || || |||| ||| || || ||||||||||| ||| | | || |||||||| Sbjct 242 GATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTAC 301 Query 155707 GCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGC 155766 | ||| |||||||||||||| || ||||||||||| || |||||||| || | | Sbjct 302 GGTAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGT 361 Query 155767 ATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTC 155826 || ||| || || | || | || |||||||| || ||| | || | | | || Sbjct 362 ATATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTC 419 Query 155827 AACCAGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAAC 155886 || | || | |||||| | | | | | || |||||||| ||||| ||||| Sbjct 420 AATGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 155887 CGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCC 155939 | || | || ||||||||||||||||| ||| | || || ||| ||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 172 bits (190), Expect = 6e-38 Identities = 290/415 (70%), Gaps = 5/415 (1%) Strand=Plus/Minus Query 155539 GGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAA 155598 || |||||||| ||| ||||||||| || |||||||| || || || ||| | || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAG 650 Query 155599 ACTACT--GAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTT 155656 || ||| || | | | || | || | || || | |||||||| || || || || | Sbjct 649 AC-ACTTGGATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACAT 592 Query 155657 ATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCA 155716 ||| ||| || || ||||||||||| ||| | || || ||||| || | ||| | Sbjct 591 ATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTA 532 Query 155717 ACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAA 155776 |||||||||||||||| ||||||||||| || |||||||| || | | || ||| | Sbjct 531 ACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCA 472 Query 155777 CTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTG 155836 | || | || || || || ||| | || ||| | || || | |||||||| | || Sbjct 471 CCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCAC 412 Query 155837 TAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTC 155896 | |||||| | ||| | | || |||||||| ||||| ||||| | || | | Sbjct 411 TTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACC 352 Query 155897 TTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGC 155951 | ||||||||||||||||| ||| | || || ||| ||||||| || || || || Sbjct 351 TAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq15657 Length=537 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 155386 GCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGT 155445 || |||||| ||||||| ||| | || ||||| |||| ||||| ||||| || ||| Sbjct 32 GCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGT 91 Query 155446 ATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACA 155491 || ||| || || |||| |||||| || |||||||||||||||| Sbjct 92 ATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584714014836120