Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq9616 262 1e-65 seq15666 223 1e-53 seq10300 167 7e-37 seq9663 109 2e-19 seq15657 96.9 1e-15 seq15682 87.8 5e-13 seq10434 87.8 5e-13 seq16512 84.2 6e-12 seq16033 84.2 6e-12 seq15444 84.2 6e-12 seq15004 84.2 6e-12 seq14884 84.2 6e-12 seq14116 84.2 6e-12 seq13890 84.2 6e-12 seq8743 84.2 6e-12 >seq9616 Length=845 Score = 262 bits (290), Expect = 1e-65 Identities = 379/532 (71%), Gaps = 2/532 (0%) Strand=Plus/Minus Query 40533 GCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTC 40592 |||| ||||| || |||||||| || || | ||| |||||||||||||||||||| || Sbjct 549 GCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGG-TC 491 Query 40593 TG-TCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 || ||| ||||| | || ||||| || ||| | | ||| | | |||||| | ||| Sbjct 490 TGCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGA 431 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAG 40711 | ||| ||||| | |||||| | |||||||||||| ||||||| || | ||||| | Sbjct 430 TTCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGGTGAA 371 Query 40712 CCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAA 40771 |||||| || || || || | || | || |||||||||| | ||||| || Sbjct 370 CCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGTTAAA 311 Query 40772 TGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGT 40831 | || || |||||||||||||||||||| || ||||| ||| ||| |||| || Sbjct 310 GCTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGT 251 Query 40832 CTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCG 40891 ||| | | ||| || || |||| || | || |||| | || | | ||||| Sbjct 250 CTCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCTGC 191 Query 40892 AATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGAC 40951 || | || ||||| || | ||| ||||||||| || | || || || || || Sbjct 190 AAGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCGAAAAC 131 Query 40952 GCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGAC 41011 |||| || || | || |||||||| ||||| | |||| |||||||||||||||| || Sbjct 130 AGCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGGAATAC 71 Query 41012 AAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| |||||||| |||||||| || |||| |||||||||||| |||| Sbjct 70 TAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATCACTGAAA 19 >seq15666 Length=534 Score = 223 bits (246), Expect = 1e-53 Identities = 365/521 (70%), Gaps = 5/521 (1%) Strand=Plus/Minus Query 40545 GGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTCTG-TCTGTTAAG 40603 || |||| ||| || || | ||| |||||||||||||||||||| |||| ||| ||||| Sbjct 532 GGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGG-TCTGCTCTATTAAG 474 Query 40604 AACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGACTGGTTAAAGTT 40663 | || ||||| || ||| | | | | | | |||||| | ||| | || | | Sbjct 473 TATGTCGGCCCATGTGTTAATTAGATGATCTTCTGAGTCTACAAGTGATTCATTGAGGGC 414 Query 40664 AAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAGCCATATGCCAAT 40723 | |||| | |||||||||||| |||||| || | ||||| | |||||| || || Sbjct 413 TCA--CATTTAAGTTAAAAGCCATCGTAGATGCTCCTAGAGAGGTGAACCATATACCTAT 356 Query 40724 AACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATATTG 40783 || || | || | || ||||||||||| | ||||| || | | || || Sbjct 355 TACTGGCCATGCTGCTAGGAAGAAGTGTAGGCTTCTTGAGTTGTTAAAGCTACCGTACTG 296 Query 40784 AAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCCTG 40843 |||||| ||||||||||||| || ||||| ||| ||| |||| ||||| | ||||| Sbjct 295 GAATATTGGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTCTCATCCTCCTG 236 Query 40844 ACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGATTGAGGA 40903 || | |||| || | || |||| | || | | ||||| || | || || Sbjct 235 TTCACATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCTGCAAGTAGAGATGA 176 Query 40904 AGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGCCTGCAACGCC 40963 ||| || | ||| ||||||||| || | || || ||||| || |||| || || Sbjct 175 AGTGACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCAAAAACAGCTGCTACTCC 116 Query 40964 GAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACAT-GAAGT 41022 | || |||||||||||||| | ||||||||||||||||||||| || ||||| |||| Sbjct 115 TAATATGTGGAATGGGTGCATTAAAATGTTGTGTTCTGCTTGGAATACTAACATAAAAGT 56 Query 41023 TGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 |||| |||||||| || |||| |||||||||||| |||| Sbjct 55 TGAAGGTTCCACTAATACCTAGTGGCATACCATCACTGAAA 15 >seq10300 Length=803 Score = 167 bits (184), Expect = 7e-37 Identities = 280/400 (70%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 40533 GCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTC 40592 |||| ||||| || |||| ||| || || | ||| |||||||||||||||||||| || Sbjct 297 GCTAGATCTAGTGGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAG-GTC 355 Query 40593 TG-TCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 || ||| ||||| | || ||||| || ||| | | ||| | | |||||| | ||| Sbjct 356 TGCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGA 415 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAG 40711 | || ||||| | ||||| | |||||||| ||| ||||||| || | ||||| | Sbjct 416 TTCATTGAAGTTCAGGCCATTTAAGTTAAAAGTCATTGTAGATACTCCTAGAGAGGTGAA 475 Query 40712 CCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCT---ATTGTT 40768 |||||| || || || || | || | || ||||||||||| || || ||||| Sbjct 476 CCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTAG---ACTTCTTGAGTTGTT 532 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 || | | ||||| |||||||||||||||||||| || ||||| ||| ||| |||| Sbjct 533 AAAGCTACCGTATTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATA 592 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||||| | ||||| || || |||| || | || |||| | || | | |||| Sbjct 593 TGTCTCATCCTCCTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCT- 651 Query 40889 CCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCA 40928 ||| | | || ||||| || | ||| ||||||||| Sbjct 652 CCGCAAGTAGGATGAAGTTACCAATGATCCATGCATAGCA 691 >seq9663 Length=843 Score = 109 bits (120), Expect = 2e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 40971 TGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTT 41030 ||||||||||||| ||| ||||||||||| |||||| | || ||| | ||||| || ||| Sbjct 344 TGGAATGGGTGCACGAGCATGTTGTGTTCCGCTTGGCATACGAACGTAAAGTTAAAGGTT 285 Query 41031 CCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAG 41090 ||||| || |||| |||||||||||| |||| || || || | || ||||| | | Sbjct 284 CCACTAATACCTAGTGGCATACCATCACTGAAACTTCCTTGTCCTATAGGGTAAACAATG 225 Query 41091 AATACAGCTAGAGCTGCT 41108 ||||| ||| |||||| Sbjct 224 AATACTGCTGATGCTGCT 207 >seq15657 Length=537 Score = 96.9 bits (106), Expect = 1e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||||||| |||||||| || |||| ||||||| Sbjct 137 TGTGTTCTGCTTGGAATACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATAC 78 Query 41053 CATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCT 41108 ||||| |||| || || || | || ||||| | |||||| ||| |||||| Sbjct 77 CATCACTGAAACTTCCTTGTCCTATAGGGTAAACAATGAATACTGCTGATGCTGCT 22 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 40971 TGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTT 41030 |||||||| |||| ||||||||||||||| |||||| | || ||| ||||| || ||| Sbjct 478 TGGAATGGATGCACGAGAATGTTGTGTTCCGCTTGGCATACGGGCATAAAGTTAAAGGTT 419 Query 41031 CCACTGATTCCTAAAGGCAT 41050 ||||| || ||||| ||||| Sbjct 418 CCACTAATACCTAATGGCAT 399 >seq15682 Length=534 Score = 87.8 bits (96), Expect = 5e-13 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || |||| |||||||| |||||||| || |||| ||||||| Sbjct 409 TGTGTTCTGCTTGGAATACTAACAGAAAGTTGAAGGTTCCACTAATACCTAGTGGCATAC 468 Query 41053 CATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCT 41108 ||||| |||| || || || | | ||||| | |||||| ||| |||||| Sbjct 469 CATCACTGAAACTTCCTTGTCCTATAAGGTAAACAATGAATACTGCTGATGCTGCT 524 >seq10434 Length=795 Score = 87.8 bits (96), Expect = 5e-13 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||| ||| |||||||| | |||| ||||||| Sbjct 335 TGTGTTCTGCTTGGAATACTAACATAAAGTAGAAGGTTCCACTTACACCTAGTGGCATAC 394 Query 41053 CATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCT 41108 ||||| |||| || || || | || ||||| | |||||| ||| |||||| Sbjct 395 CATCACTGAAACTTCCTTGTCCTACAGGGTAAACAATGAATACTGCTGATGCTGCT 450 >seq16512 Length=503 Score = 84.2 bits (92), Expect = 6e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||||||| |||||||| | ||||| ||||||| Sbjct 221 TGTGTTCTGCTTGGAATACTAACATAAAGTTGAAGGTTCCACTTACACCTAATGGCATAC 162 Query 41053 CATCAGAGAAA 41063 ||||| |||| Sbjct 161 CATCACTGAAA 151 >seq16033 Length=522 Score = 84.2 bits (92), Expect = 6e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||||||| |||||||| || |||| ||||||| Sbjct 249 TGTGTTCTGCTTGGAATACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATAC 308 Query 41053 CATCAGAGAAA 41063 ||||| |||| Sbjct 309 CATCACTGAAA 319 >seq15444 Length=545 Score = 84.2 bits (92), Expect = 6e-12 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||| ||| |||||||| | ||| ||||||| Sbjct 377 TGTGTTCTGCTTGGAATACTAACATAAAGTAGAAGGTTCCACTTACAGCTAGTGGCATAC 318 Query 41053 CATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCT 41108 ||||| |||| || || || | || ||||| | |||||| ||| |||||| Sbjct 317 CATCACTGAAACTTCCTTGTCCTACAGGGTAAACAATGAATACTGCTGATGCTGCT 262 >seq15004 Length=563 Score = 84.2 bits (92), Expect = 6e-12 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||| ||| |||||||| | ||| ||||||| Sbjct 330 TGTGTTCTGCTTGGAATACTAACATAAAGTAGAAGGTTCCACTTACAGCTAGTGGCATAC 389 Query 41053 CATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCT 41108 ||||| |||| || || || | || ||||| | |||||| ||| |||||| Sbjct 390 CATCACTGAAACTTCCTTGTCCTACAGGGTAAACAATGAATACTGCTGATGCTGCT 445 >seq14884 Length=573 Score = 84.2 bits (92), Expect = 6e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||||||| |||||||| || |||| ||||||| Sbjct 368 TGTGTTCTGCTTGGAATACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATAC 427 Query 41053 CATCAGAGAAA 41063 ||||| |||| Sbjct 428 CATCACTGAAA 438 >seq14116 Length=612 Score = 84.2 bits (92), Expect = 6e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 40993 TGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATAC 41052 |||||||||||||||| || ||||| |||||||| |||||||| || |||| ||||||| Sbjct 339 TGTGTTCTGCTTGGAATACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATAC 398 Query 41053 CATCAGAGAAA 41063 ||||| |||| Sbjct 399 CATCACTGAAA 409 >seq13890 Length=621 Score = 84.2 bits (92), Expect = 6e-12 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 40969 TATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATG 41028 ||||||||||||||| ||| |||||||||||||||||||| || ||||| ||||| || | Sbjct 525 TATGGAATGGGTGCACGAGCATGTTGTGTTCTGCTTGGAATACTAACATAAAGTTAAAGG 584 Query 41029 TTCC 41032 |||| Sbjct 585 TTCC 588 >seq8743 Length=905 Score = 84.2 bits (92), Expect = 6e-12 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40994 GTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACC 41053 ||||||||||||||| || ||||| |||||||| | |||||| || |||| |||||||| Sbjct 220 GTGTTCTGCTTGGAATACTAACATAAAGTTGAAGGCTCCACTAATACCTAGCGGCATACC 161 Query 41054 ATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTG 41109 |||| |||| || || || | ||| | || |||||| ||| ||||||| Sbjct 160 ATCACTGAAACTTCCTTGCCCTATAGGAGATACATTGAATACTGCTGATGCTGCTG 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143674111913118