Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq9616 280 2e-70 seq15666 223 4e-53 seq10300 172 6e-38 seq14097 104 3e-17 seq9663 89.7 6e-13 >seq9616 Length=845 Score = 280 bits (310), Expect = 2e-70 Identities = 393/545 (72%), Gaps = 6/545 (1%) Strand=Plus/Minus Query 67362 GCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCT 67421 || || || || ||||||||||| || || | ||| ||||| |||||||| || || || Sbjct 549 GCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 490 Query 67422 GCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGAT 67481 ||||| ||||| ||||| ||||| || ||| | | ||| ||| ||| || | ||| Sbjct 489 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGAT 430 Query 67482 TGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAAC 67541 | ||||||||| | ||| || | ||| || ||||| || || || || | | |||||| Sbjct 429 TCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGGTGAAC 370 Query 67542 CAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAA 67601 || || | | || || |||| || ||||||||||| | |||||||||||||| ||| Sbjct 369 CATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGTT-AAA 311 Query 67602 GATGCA-TACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGT 67660 | | | |||||||| || | | ||| ||||||||||| || || ||| | || || Sbjct 310 GCTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGT 251 Query 67661 CTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCT 67720 ||| || | |||||||| | || || | || |||| | | | || ||| ||||| Sbjct 250 CTCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGT-TAGATC-CAAGTGTCTCT 193 Query 67721 G--ATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAAT 67778 | | ||||| ||||| || | || || ||||||||||| || || || || ||||| Sbjct 192 GCAAGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCGAAA 133 Query 67779 ACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAAC 67838 ||| |||||||||| | || |||||||| ||||| | ||| |||| ||||||||||| Sbjct 132 ACAGCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGGAAT 73 Query 67839 ACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCT 67898 || ||||| |||| || || ||| |||||| || ||||| | ||| |||| ||| Sbjct 72 ACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATCACTGAAACTTCCT 13 Query 67899 TGACC 67903 || || Sbjct 12 TGTCC 8 >seq15666 Length=534 Score = 223 bits (246), Expect = 4e-53 Identities = 375/534 (70%), Gaps = 9/534 (2%) Strand=Plus/Minus Query 67374 GGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTGTTAAGG 67433 ||||||| ||| || || | ||| ||||| |||||||| || || ||||||| ||||| Sbjct 532 GGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCTGCTCTATTAAGT 473 Query 67434 ATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTGAAGTTG 67493 ||||| ||||| || ||| | | | | ||| ||| || | |||| |||| | Sbjct 472 ATGTCGGCCCATGTGTTAATTAGATGATCTTCTGAGTCTACAAGTGATTCATTGAGGGCT 413 Query 67494 AAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGATGCAGACC 67553 | | || | ||| || ||||| || || | || | | |||||||| || | | Sbjct 412 CA--CATTTAAGTTAAAAGCCATCGTAGATGCTCCTAGAGAGGTGAACCATATACCTATT 355 Query 67554 ACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGCA-TACTG 67612 || || |||| || ||||||||||| || |||||||||||||| |||| | | ||||| Sbjct 354 ACTGGCCATGCTGCTAGGAAGAAGTGTAGGCTTCTTGAGTTGTT-AAAGCTACCGTACTG 296 Query 67613 GAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCTTCTTG 67672 ||| || | ||| ||||||||||| || || ||| | || ||||| || || || Sbjct 295 GAATATTGGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTCTCATCCTCCTG 236 Query 67673 TCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATA--AGAGAA 67730 | | | | || || | || |||| | | | || ||| |||||| | ||||| Sbjct 235 TTCACATATATAGCCTGAATTGAGTGAGT-TAGATCCA-AGTGTCTCTGCAAGTAGAGAT 178 Query 67731 GAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACT 67790 ||||| || | || || ||||||||||| || || || || || || ||| |||||||| Sbjct 177 GAAGTGACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCAAAAACAGCTGCTACT 118 Query 67791 CCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACAT-GTA 67849 || | || |||||||||||||| | |||||||| ||||||||||| || ||||| | Sbjct 117 CCTAATATGTGGAATGGGTGCATTAAAATGTTGTGTTCTGCTTGGAATACTAACATAAAA 58 Query 67850 GTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACC 67903 ||| || || ||| |||||| || ||||| | ||| |||| ||||| || Sbjct 57 GTTGAAGGTTCCACTAATACCTAGTGGCATACCATCACTGAAACTTCCTTGTCC 4 >seq10300 Length=803 Score = 172 bits (190), Expect = 6e-38 Identities = 291/415 (70%), Gaps = 5/415 (1%) Strand=Plus/Plus Query 67362 GCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCT 67421 || || || || ||||||| ||| || || | ||| ||||| |||||||| || || || Sbjct 297 GCTAGATCTAGTGGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 356 Query 67422 GCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGAT 67481 ||||| ||||| ||||| ||||| || ||| | | ||| ||| ||| || | ||| Sbjct 357 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGAT 416 Query 67482 TGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAAC 67541 | |||||||| | || || | ||| || | ||| || || || || | | |||||| Sbjct 417 TCATTGAAGTTCAGGCCATTTAAGTTAAAAGTCATTGTAGATACTCCTAGAGAGGTGAAC 476 Query 67542 CAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAA 67601 || || | | || || |||| || ||||||||||| ||||||||||||||||| ||| Sbjct 477 CATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTAGACTTCTTGAGTTGTT-AAA 535 Query 67602 GAT-GCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGT 67660 | | | || ||||| || | | ||| ||||||||||| || || ||| | || || Sbjct 536 GCTACCGTATTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGT 595 Query 67661 CTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCT 67720 ||| || || |||||||| | || || | || |||| | | | || ||| |||| Sbjct 596 CTCATCCTCCTGTCCGAATATATAGCCTGAATTGAGTGAGT-TAGATC-CAAGTGTCTCC 653 Query 67721 GATAAGA-GAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACC 67774 | | | || ||||| || | || || ||||||||||| || || || || || Sbjct 654 GCAAGTAGGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCC 708 >seq14097 Length=611 Score = 104 bits (114), Expect = 3e-17 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 68096 TGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACAACAGCACC 68155 ||||||||| | ||||| ||||||| || || || || ||||| || | || || || Sbjct 218 TGCTTCCCATACTGGATAAAAGTGAACTCCTATAGCATTAGAACTTGGTATTACTGCTCC 159 Query 68156 AGAAAT--GATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGATACCATCG 68213 | || |||||||||||| || | ||| ||||| |||||||||||||| |||| Sbjct 158 TGTTATTAGATGTTGTTACCATATAGGAGGCTTCCTGCTACAGGTTCTCTGATTACATCT 99 Query 68214 ATATCAACTGGAGGTGCTGCAATGAATGC 68242 || || |||||||||||| ||||||||| Sbjct 98 ATGTCTACTGGAGGTGCTAGAATGAATGC 70 Score = 104 bits (114), Expect = 3e-17 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 68096 TGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACAACAGCACC 68155 ||||||||| | ||||| ||||||| || || || || ||||| || | || || || Sbjct 564 TGCTTCCCATACTGGATAAAAGTGAACTCCTATAGCATTAGAACTTGGTATTACTGCTCC 505 Query 68156 AGAAAT--GATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGATACCATCG 68213 | || |||||||||||| || | ||| ||||| |||||||||||||| |||| Sbjct 504 TGTTATTAGATGTTGTTACCATATAGGAGGCTTCCTGCTACAGGTTCTCTGATTACATCT 445 Query 68214 ATATCAACTGGAGGTGCTGCAATGAATGC 68242 || || |||||||||||| ||||||||| Sbjct 444 ATGTCTACTGGAGGTGCTAGAATGAATGC 416 >seq9663 Length=843 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 67800 TGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTA 67859 ||||||||||||| || |||||||| || |||||| | |||||| | ||||||| || Sbjct 344 TGGAATGGGTGCACGAGCATGTTGTGTTCCGCTTGGCATACGAACGTAAAGTTAAAGGTT 285 Query 67860 CCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAG 67919 ||| |||||| || ||||| | ||| |||| ||||| || | ||| || || | | Sbjct 284 CCACTAATACCTAGTGGCATACCATCACTGAAACTTCCTTGTCCTATAGGGTAAACAATG 225 Query 67920 AACACAGCGAATGCTGC 67936 || || || ||||||| Sbjct 224 AATACTGCTGATGCTGC 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566829721453320