Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq8042 288 1e-72 seq9616 212 7e-50 seq15666 165 9e-36 seq10300 143 3e-29 seq6435 86.0 7e-12 seq214 82.4 9e-11 >seq8042 Length=962 Score = 288 bits (318), Expect = 1e-72 Identities = 467/663 (70%), Gaps = 17/663 (3%) Strand=Plus/Plus Query 66585 TATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGT 66644 || || |||| || || | || || ||||| || |||||| ||||| ||||| ||| Sbjct 53 TACTATAGTGAGTTGCCTCTTGGAAGTACTTCCTCAGGGAATTGGAAGTTCTCATGAGGT 112 Query 66645 TGATCGATAGG--TGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGT 66702 || || | || ||||| |||| ||| | ||||||||| | ||| |||||||| || | Sbjct 113 TGTTC--TTGGACTGCCATCCATAAACGGATACCTTCATTAAGTAGTATGTTCTTAGTAT 170 Query 66703 AGAACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAG 66762 |||| ||||| ||||||||||| ||||| || | | ||| || |||| ||||||||| | Sbjct 171 AGAATGTCTCAAACTCTGGGTCCTCTGCAGCCTTTA-CTCCTGAGATATAAAGTCATATG 229 Query 66763 CACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAG 66822 | | |||||||| || || || || || || || ||| ||||| | || || | Sbjct 230 CTCTAAGGTTGAATGCTAGTCCTATTATTCCTATAGAAGAGGTCCACATTCCTGCTACTG 289 Query 66823 GAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCT 66882 | || || | | ||||| || | ||| ||||||||| ||| || | || | | | Sbjct 290 GTACTAATAGTAGGAAGAAGTGAAGCCATCTCTTATTGGAAAATGCTACTCCGAGTACTT 349 Query 66883 GAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGA 66942 |||||||||| | || || || | ||| |||||||| || || ||| || | || Sbjct 350 GAGACCAGAATCTATTAGCTGTTAGCATAGAGTAAGTCTCCTCAGGTTGCGTTGGAGAGA 409 Query 66943 ATGCTTTGAA---AGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAA 66999 ||| | |||| |||| ||||| |||||||| ||| | ||| || ||||||| Sbjct 410 ATGATCTGAAGGTTGTGTAAGCTTG---ACCATCTTGATATATAGTGTTAACTACTGTGG 466 Query 67000 CACCATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAA 67059 ||||||| || || || | | || | |||| ||| ||||||| ||||||||||| | Sbjct 467 CACCATGTATAGCTGATAAAAGAGCTGCTCCCAAGATTCCTGCTATTCCCATCATATGGA 526 Query 67060 ACGGGTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTG 67119 | ||||| | ||||| || || || ||||||||||| || ||||| | ||||| |||| Sbjct 527 ATGGGTTTAGAGTCCAATTGTGAAAGCCTTGTAGGAATAGGAGGAACCTGAAGATGGCTG 586 Query 67120 AGACCCCGAAAGAT-GGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAG 67178 || || | || | || || || |||||| |||||||| | |||||| |||| | Sbjct 587 CAACTCC-ATAGCTAGGTGCAAAGAACCAAGAGGATTGACCTAAAGGGTAAATGACGA-- 643 Query 67179 ACACTAACAAAAACAG--CGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATAC 67236 ||||| | | | || ||||| || | ||| || | ||||||||| ||||| |||| Sbjct 644 ACACTGATATGTATAGTATTATAGGGCCTGTGAAGGCTAGAGCATTGTACGGACGTATAC 703 Query 67237 CGA 67239 || Sbjct 704 TGA 706 >seq9616 Length=845 Score = 212 bits (234), Expect = 7e-50 Identities = 366/524 (70%), Gaps = 12/524 (2%) Strand=Plus/Minus Query 67843 GCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCA 67902 || || || || |||||||||||||| || | ||||||||| ||||||||||| | | Sbjct 549 GCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 490 Query 67903 GCGCGGTTGAGAACGTCTGCCCAGGT---AGGCAGA--ACCTTACCAGAACTATCAAGGA 67957 || | || || | ||| ||||| || | ||| ||||| || ||| |||| Sbjct 489 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGT-CTA-CAAGT- 433 Query 67958 TAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAG 68017 || | ||||||||| | |||||| | ||| || ||||| || || || || | | Sbjct 432 --GATTCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGG 375 Query 68018 TGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGT 68077 ||||||| ||||| | || |||||||| || ||||||||||| | | ||||||| Sbjct 374 TGAACCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGT 315 Query 68078 TGAACGATGCA-TACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTG 68136 | || | | | |||||||| || || | ||| |||||||||||||| || ||| | Sbjct 314 TAAA-GCTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTA 256 Query 68137 TAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTT 68196 || ||||| || | || ||||| | || || | || | || | || | || || Sbjct 255 TATGTCTCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTC 196 Query 68197 TCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCA 68256 || || || || ||||| |||| || |||||||| |||||||| |||||||| || Sbjct 195 TCTGCAAGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCG 136 Query 68257 AATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGG 68316 || || | || || || | || ||||| || ||||| | ||| |||| ||||||||| Sbjct 135 AAAACAGCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGG 76 Query 68317 AACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCAT 68360 || || | ||| ||||||| || ||| ||| || || ||||| Sbjct 75 AATACTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCAT 32 >seq15666 Length=534 Score = 165 bits (182), Expect = 9e-36 Identities = 348/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 67855 GGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCAGCGCGGTTGAGA 67914 ||||||| |||||| || | ||||||||| ||||||||||| | | || | || || Sbjct 532 GGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCTGCTCTATTAAGT 473 Query 67915 ACGTCTGCCCAGGT---AGGCAGA--ACCTTACCAGAACTATCAAGGATAGACTGGTTGA 67969 | ||| ||||| || | ||| | ||| || ||| |||| || | |||| Sbjct 472 ATGTCGGCCCATGTGTTAATTAGATGATCTTCTGAGT-CTA-CAAGT---GATTCATTGA 418 Query 67970 AGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAACCAGATAC 68029 | | |||| | ||| || ||||| || | || || | |||||||| |||| Sbjct 417 GGGCTCA--CATTTAAGTTAAAAGCCATCGTAGATGCTCCTAGAGAGGTGAACCATATAC 360 Query 68030 CAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGATGCAT 68089 | | || |||||||| || ||||||||||| || | |||||||| || | | Sbjct 359 CTATTACTGGCCATGCTGCTAGGAAGAAGTGTAGGCTTCTTGAGTTGTTAAAGCTACCGT 300 Query 68090 ACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTT 68149 ||||||| || | | ||| |||||||||||||| || ||| | || ||||| || | Sbjct 299 ACTGGAATATTGGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTCTCATCCT 240 Query 68150 CTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTG 68209 | || | | | || || | || | || | || | || || || || || | Sbjct 239 CCTGTTCACATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCTCTGCAAGTAGAG 180 Query 68210 AAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACGCCAGCAA 68269 | ||||| |||| || |||||||| |||||||| |||||||| ||||| || | || | Sbjct 179 ATGAAGTGACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCAAAAACAGCTGCTA 120 Query 68270 CGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACCAGCAT-G 68328 | || | || ||||| |||||||| | |||||||| ||||||||||| || | ||| Sbjct 119 CTCCTAATATGTGGAATGGGTGCATTAAAATGTTGTGTTCTGCTTGGAATACTAACATAA 60 Query 68329 TAGTTGAAAGTACCAGAAATGCCGAGAGGCAT 68360 ||||||| || ||| ||| || || ||||| Sbjct 59 AAGTTGAAGGTTCCACTAATACCTAGTGGCAT 28 >seq10300 Length=803 Score = 143 bits (158), Expect = 3e-29 Identities = 287/419 (68%), Gaps = 11/419 (3%) Strand=Plus/Plus Query 67843 GCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCA 67902 || || || || ||||||| |||||| || | ||||||||| ||||||||||| | | Sbjct 297 GCTAGATCTAGTGGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 356 Query 67903 GCGCGGTTGAGAACGTCTGCCCAGGT---AGGCAGA--ACCTTACCAGAACTATCAAGGA 67957 || | || || | ||| ||||| || | ||| ||||| || ||| |||| Sbjct 357 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGT-CTA-CAAGT- 413 Query 67958 TAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAG 68017 || | |||||||| | ||||| | ||| || | ||| || || || || | | Sbjct 414 --GATTCATTGAAGTTCAGGCCATTTAAGTTAAAAGTCATTGTAGATACTCCTAGAGAGG 471 Query 68018 TGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGT 68077 ||||||| ||||| | || |||||||| || ||||||||||| || | ||||||| Sbjct 472 TGAACCATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTAGACTTCTTGAGTTGT 531 Query 68078 TGAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGT 68137 | || | || ||||| || || | ||| |||||||||||||| || ||| | | Sbjct 532 TAAAGCTACCGTATTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTAT 591 Query 68138 AAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTT 68197 | ||||| || || || ||||| | || || | || | || | || | || || | Sbjct 592 ATGTCTCATCCTCCTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCCAAGTGTCT 651 Query 68198 CACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCA 68256 | || || || ||||| |||| || |||||||| |||||||| |||||||| ||| Sbjct 652 CCGCAAGTAG-GATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCA 709 >seq6435 Length=1119 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 43022 TGGGAGATACAAGGATCGAACTTGTGACAATCTCGGTGTAAACGAGGTGCTCTACCGCTG 43081 |||| ||||| ||||||||||| ||||| ||||||| ||||| |||||||||||||| Sbjct 327 TGGGCGATACTAGGATCGAACTAGTGACCCCTTCGGTGTGAACGAAGTGCTCTACCGCTG 386 Query 43082 AGCTAATCTCCC 43093 |||||||| ||| Sbjct 387 AGCTAATCGCCC 398 >seq214 Length=12498 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 43022 TGGGAGATACAAGGATCGAACTTGTGACAATCTCGGTGTAAACGAGGTGCTCTACCGCTG 43081 |||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||| ||| Sbjct 6885 TGGGCGATACAAGGTTCGAACTTGTGACCCCTTCGATGTCAACGAAGTGCTCTACCACTG 6826 Query 43082 AGCTAATCTCCCGTT 43096 |||||||| ||| || Sbjct 6825 AGCTAATCGCCCTTT 6811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571935863177640