Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq8042 273 2e-68 seq9616 250 3e-61 seq15666 196 5e-45 seq10300 167 3e-36 seq9663 95.1 1e-14 seq15657 82.4 8e-11 >seq8042 Length=962 Score = 273 bits (302), Expect = 2e-68 Identities = 457/655 (70%), Gaps = 7/655 (1%) Strand=Plus/Minus Query 159661 GTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTAT--TGCTGTTTTTGTCAGCGT 159718 |||| ||||| ||||||||| | || ||| | || ||||| | || | | |||| || Sbjct 703 GTATACGTCCGTACAATGCTCTAGCCTTCACAGGCCCTATAATACTATACATATCAGTGT 644 Query 159719 CTTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGC 159778 || |||| ||||| || ||||| ||| |||||| || || || || ||| || || Sbjct 643 --TCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTCTTTGCACCTAGCTATGGAGTTGC 586 Query 159779 AGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTT 159838 ||| ||||| || ||||| | ||||| ||||| |||||||| ||||| |||| || || Sbjct 585 AGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTTCACAATTGGACTCTAAACCCATT 526 Query 159839 CCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGT 159898 ||||||||||||| | || || || | || | ||| || | || || ||||| | Sbjct 525 CCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCTCTTTTATCAGCTATACATGGTGC 466 Query 159899 TACTGTAGAGAACACACTGTATGAAGATGGAGAA-CAAGCAAATACCTTTAAGGCGTTTG 159957 || |||| ||||| | ||| ||||||| || | || | ||||| | | || Sbjct 465 CACAGTAGTTAACACTATATATCAAGATGGTCAAGCTTACACA-ACCTTCAGATCATTCT 407 Query 159958 ATTCAACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 160017 | |||| ||| |||||||||||||||||| | || || || | |||||||| || Sbjct 406 CTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACAGCTAATAGATTCTGGTCTCAAG 347 Query 160018 TCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTG 160077 | |||| | || ||||| || ||| | |||||||| |||||| | | || || || | Sbjct 346 TACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACTTCTTCCTACTATTAGTACCAG 287 Query 160078 TTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTT 160137 | || | ||||| || ||||| || || || || || || | || ||| | || | Sbjct 286 TAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGACTAGCATTCAACCTTAGAGCAT 227 Query 160138 ACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACA 160197 | || || || ||| ||| | | || ||||| || ||||| |||||||| ||||| | Sbjct 226 ATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAGGACCCAGAGTTTGAGACATTCTATA 168 Query 160198 CCAAAAACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCC 160257 | || ||||| ||| | || ||||| | ||| |||| ||||| || ||||| | Sbjct 167 CTAAGAACATACTACTTAATGAAGGTATCCGTTTATGGATGGCAGTCCAAGAACAACCTC 108 Query 160258 ATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAATA 160312 |||| ||||| ||||| || |||||| | || ||||||||| | || || || Sbjct 107 ATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAGAGGCAACTCACTATAGTA 53 >seq9616 Length=845 Score = 250 bits (276), Expect = 3e-61 Identities = 383/544 (70%), Gaps = 4/544 (1%) Strand=Plus/Plus Query 158021 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATG 158080 || ||||| |||| |||| |||||| || ||||| ||| || || |||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 158081 CTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCT 158140 | ||||||||||||||||||| ||| | ||||| || ||||| || | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 158141 GGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTC 158200 | || ||||| |||||||| ||| ||||||||| ||| | || ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 158201 GTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAA 158260 || || || || | | | |||| || | || || | ||||| || |||| Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 158261 GAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCT 158320 ||||| |||| ||| ||||||||||| ||||| ||| | | || ||||| ||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 158321 TCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATC 158380 || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 158381 TGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAAC 158440 ||||||||| | || || || || || ||||| || ||| | || ||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 158441 CAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACC 158498 | || | | || |||| |||| | | | ||||| ||||| || |||| || Sbjct 428 GAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 158499 GCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACC 158558 | || | || ||||||||||| ||||||||| | || ||||||||||||||||| || | Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATC 545 Query 158559 TTGC 158562 | || Sbjct 546 TAGC 549 >seq15666 Length=534 Score = 196 bits (216), Expect = 5e-45 Identities = 367/535 (69%), Gaps = 7/535 (1%) Strand=Plus/Plus Query 158021 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTAC-AT 158079 || ||||| |||| |||| |||||| || ||||| ||| || || |||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 158080 GCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGC 158139 | | ||||||||||||||||||||||| | |||||||| ||||| || | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 158140 TGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACT 158199 | || || || |||||||| ||| ||||||||| ||| | || ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 158200 CGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGA 158259 || || || || | | | |||| || | || || | | | || ||||| Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 158260 AGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGC 158319 ||||| |||| ||| ||||||||||| ||||| ||| | || ||||| |||| Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 158320 TTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCAT 158379 | || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 158380 CTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAA 158439 ||||||||| | || || | || |||||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 158440 CCAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTACTGAAC 158497 | || | | || |||| | || | | | ||||| ||||| || |||| || Sbjct 422 TGAATCACTTGTAGA--CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 158498 CGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 158552 | || | || ||||||||||| ||||||||| | || |||||| ||||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 167 bits (184), Expect = 3e-36 Identities = 288/415 (69%), Gaps = 5/415 (1%) Strand=Plus/Minus Query 158150 GGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAA 158209 || |||||||| ||| ||||||||| ||| | || ||||| || | | || || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 158210 ACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGACCTAT 158269 || || | | | |||| || | || || | ||||| || ||||| ||||| ||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 158270 AACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAAC 158329 | ||| ||||||||||| ||||| ||| | | || |||||||||| | || ||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 158330 AACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACC 158389 ||||| | | ||||||||||| || |||||||| || | || || ||||||||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 158390 GCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATC 158449 | || || || || || ||| | || ||| | || || | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 158450 CTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTC 158507 | || |||| |||| | | | ||||| ||||| || |||| || | || | | Sbjct 409 GTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACC 352 Query 158508 TTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGC 158562 | ||||||||||| ||||||||| | || |||||| |||||||||| || || || Sbjct 351 TAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq9663 Length=843 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 157988 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATG 158047 |||||||| || |||||| | || || ||| | || ||||| |||| |||| |||| Sbjct 208 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 267 Query 158048 CCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATC 158107 || || ||||| ||| || ||||||| | | | |||| |||||| ||||||||||| Sbjct 268 CCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATG 327 Query 158108 CTTATGCACCCGTTCCA 158124 || ||||||| ||||| Sbjct 328 CTCGTGCACCCATTCCA 344 >seq15657 Length=537 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 157988 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATG 158047 |||||||| || |||||| | || || ||| | || ||||| |||| |||| |||| Sbjct 23 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 82 Query 158048 CCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACA 158102 || || ||||| ||| || || |||| ||| | ||||||||||||||||||| Sbjct 83 CCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548260769969640