Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq486 154 2e-32 seq1036 140 5e-28 seq44 125 1e-23 seq10619 98.7 1e-15 seq6724 93.3 6e-14 >seq486 Length=7659 Score = 154 bits (170), Expect = 2e-32 Identities = 187/257 (73%), Gaps = 12/257 (5%) Strand=Plus/Minus Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAAC 99005 ||| | || || ||||| || |||||||| || |||||||| |||||||||| |||||| Sbjct 3273 AAGGACGATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGATGCGCTTCAAC 3214 Query 99006 TTGCAAGAAG------------GTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGC 99053 | | || | | ||||| ||||| || |||||| |||| |||| Sbjct 3213 CTCGATGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGTCCACACGCGC 3154 Query 99054 TCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAA 99113 || || ||||| || |||||||||||||| ||||||||||| || ||| |||||||| Sbjct 3153 TCGATCATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGCCTACCTGAAG 3094 Query 99114 GATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTA 99173 || || || ||||| |||||||| ||||| || ||| ||||||| ||||| Sbjct 3093 GACAACAAAGTCACCATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCTCGGCCCGGTC 3034 Query 99174 TACGGTAAGCAGTGGCG 99190 ||||| ||||||||||| Sbjct 3033 TACGGCAAGCAGTGGCG 3017 >seq1036 Length=4296 Score = 140 bits (154), Expect = 5e-28 Identities = 180/248 (73%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 98946 AAGAAA---GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTC 99002 |||||| ||||| ||||| |||||||| | | | || ||| | || |||||||| Sbjct 1738 AAGAAAACCGACCGCACCGGCACAGGCACCATCAGTGTGTTTGGCTATCAAATGCGTTTT 1797 Query 99003 AACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATC 99062 | || ||| | || || ||||| || || ||||| ||||| ||||| || ||||| Sbjct 1798 GATTTACAACAGGGCTTTCCGCTTGTTACCACCAAAAAATGCCATCTGCGTTCGATTATT 1857 Query 99063 CATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGT 99122 |||||| | |||||||| | ||||| || ||||| || |||||| |||| ||||| Sbjct 1858 CATGAATTACTGTGGTTTTTAAAAGGTGAAACCAACATTGGCTACCTGCAAGAAAATGGC 1917 Query 99123 GTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAG 99182 ||| | || ||| | || |||||| ||| || || ||||| ||||||||||| | Sbjct 1918 GTATCAATCTGGAATGAGTGGGCGACTGAAACAGGTGAGCTCGGACCGGTATACGGCGCG 1977 Query 99183 CAGTGGCG 99190 |||||||| Sbjct 1978 CAGTGGCG 1985 >seq44 Length=32007 Score = 125 bits (138), Expect = 1e-23 Identities = 179/247 (72%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCG-TTTCAA 99004 |||| ||||| |||||||||||||||| || | ||||| || |||||||| ||| | Sbjct 27359 AAGACCGACCGGACCGGTACAGGCACGCGCTCGGTGTTCGGGCATCAGATGCGCTTTGAT 27418 Query 99005 CTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGC-GTTGCCACCTGCGCTCTATTATCC 99063 || || |||||||| |||| ||||| ||| | ||| || | || || | | Sbjct 27419 CTGGCCGACGGGTTTCCCA-TGGTCACGACTAAGAAGCTGC-ACTTAAAGTCCATCGTGC 27476 Query 99064 ATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTG 99123 |||| ||||| |||||| | |||||||| ||||| || || |||| ||||| | Sbjct 27477 ATGAGCTGCTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGGGG 27536 Query 99124 TAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGC 99183 | | ||||||||||||||||||||| | || || || ||||| || || || || | | Sbjct 27537 TGAGCATTTGGGACGAATGGGCGGATGAGAAGGGTGATCTCGGGCCAGTCTATGGGCACC 27596 Query 99184 AGTGGCG 99190 ||||||| Sbjct 27597 AGTGGCG 27603 Score = 102 bits (112), Expect = 1e-16 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 99585 AAGTTGTCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAAC 99644 ||| | || || |||||||||||||| || || ||||||||||| |||||||| ||| Sbjct 27779 AAGCTTTCCTGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTTCAAC 27838 Query 99645 ATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGC 99704 ||||| || ||||| || || | || ||| | || ||| | || | | |||||| Sbjct 27839 ATCGCCTCCTATGCGCTGCTCTTGCAGATGATGGCGCAGGTGACGGGGCTCGAAGTGGGC 27898 Query 99705 GATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAG 99758 || ||| || || || |||| |||||| ||||| || |||||||||||| Sbjct 27899 GAGTTCATCCACACTTTTGGGGATGCGCATCTCTATTCAAATCATCTGGAACAG 27952 >seq10619 Length=779 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 99054 TCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAA 99113 || || |||||||| ||||||||||| ||| || || ||||| ||| || ||||| Sbjct 28 TCGATCATCCATGAGCTGCTGTGGTTTCTGGCGGGTGATACCAACATCGCCTATCTGAAG 87 Query 99114 GATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTA 99173 | ||||| || | || |||||||||||||| ||| |||| ||||| || || ||||| Sbjct 88 GCGAATGGCGTCTCAATCTGGGACGAATGGGCCGACGAAAACGGCGATCTGGGGCCGGTC 147 Query 99174 TACGGTAAGCAGTGGCG 99190 ||||| | || ||||| Sbjct 148 TACGGCCATCAATGGCG 164 Score = 91.5 bits (100), Expect = 2e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 99585 AAGTTGTCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAAC 99644 ||| | || ||||||||||| ||||| |||||||| | || |||| ||||| || || Sbjct 340 AAGCTTTCGTGTCAGCTCTACCAGCGCAGTGCCGATATCTTTCTGGGGGTGCCCTTCAAT 399 Query 99645 ATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACA-GCAGGCGAATATGGCGGTGGG 99703 || || || ||||| || ||| | ||| |||| || | ||| || || || ||| Sbjct 400 ATTGCCTCCTATGCGCTGTTGACAGAGATGATTGCCCAGGTCTGCG-ATCTGAAGGCGGG 458 Query 99704 CGATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGC 99760 |||||| ||| || ||||| | |||||| ||| ||||||||||||||||| Sbjct 459 CGATTTTGTCCACACGTTTGGTGACGCGCATCTTTATCTGAACCATCTGGAACAGGC 515 >seq6724 Length=1088 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 99045 CACCTGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAG 99104 || |||||||| || | |||||| | ||||||| || || || ||||| ||| | Sbjct 806 CATCTGCGCTCAATCGTTCATGAATTATTGTGGTTTTTGTCTGGTGATACCAACATCAAA 747 Query 99105 TACCTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTC 99164 ||||| || || |||||||| | ||||||||||||||||| ||| |||| || || | Sbjct 746 TACCTCAAGGAAAATGGTGTTTCGATTTGGGACGAATGGGCTGACGAAAACGGTGATTTG 687 Query 99165 GGTCCGGTATACGGTAAGCAGTGGCG 99190 || || ||||| || | || ||||| Sbjct 686 GGCCCTGTATATGGGCATCAATGGCG 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716488303897080