Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq8042 302 5e-77 seq9616 214 2e-50 seq15666 165 9e-36 seq10300 138 1e-27 seq14874 82.4 8e-11 seq433 82.4 8e-11 >seq8042 Length=962 Score = 302 bits (334), Expect = 5e-77 Identities = 608/891 (68%), Gaps = 13/891 (1%) Strand=Plus/Minus Query 152482 ACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACT 152541 || |||||| || || || |||||||| || || | || || |||||| | || Sbjct 947 ACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGATGTAACTTTTTAACA 888 Query 152542 GCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCT 152601 || |||||| || ||||| || ||||| |||||||| || || | ||||| || Sbjct 887 GCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTACTATTGTGGGGACCA 828 Query 152602 GAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCG 152661 || || ||||| |||| ||||| | | | || | ||| | || | | Sbjct 827 GAAGCACAAGGTTATTTTACAAGATGAACACTTATGGGCTCTTTATGGACCTTCATTACT 768 Query 152662 CTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTC-GCCAGTTTGAACTGGCACGTCT 152720 | ||| || || | || || || || || | |||||||| | || | | Sbjct 767 TTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGGCAGTTTGAGATAGCCAGCTT 709 Query 152721 CATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAG 152780 || |||| ||||| ||||||||| | || ||| | || ||||| | | | || Sbjct 708 AGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCCCTATAA-TACTATACATAT 650 Query 152781 C-GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCC-ATCTTTCGGG 152838 | || || |||| |||||| | |||||||| |||||| || || || | || | || Sbjct 649 CAGTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTCTTTGCACCTAGCTAT-GGA 591 Query 152839 GTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAAT 152898 || ||||| |||||| | ||||| || ||||| ||||| || ||||| ||||| | || Sbjct 590 GTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTTCACAATTGGACTCTAAAC 531 Query 152899 CCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCAT 152958 || || ||||||||||| | ||||| || ||||||| || | | || || || ||| Sbjct 530 CCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCTCTTTTATCAGCTATACAT 471 Query 152959 GGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAAC---ACTTTCAAA 153015 |||| ||||||| || ||| | |||||||||||| ||||| || || |||| | Sbjct 470 GGTGCCACAGTAGTTAACACTATATATCAAGATGGT---CAAGCTTACACAACCTTCAGA 414 Query 153016 GCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGG 153075 | ||| || ||| || ||||| || || ||| | || ||||| | |||||| Sbjct 413 TCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACAGCTAATAGATTCTGG 354 Query 153076 TCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTT 153135 || || || | ||| | || ||| |||||| | |||||||| ||||| | || || Sbjct 353 TCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACTTCTTCCTACTATTA 294 Query 153136 GTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTT 153195 ||||| || || | |||||||||||||| ||||| || || || || |||| ||| Sbjct 293 GTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGACTAGCATTCAACCTT 234 Query 153196 CGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACG 153255 | || || || ||| |||||| || | | | ||| |||| || || || |||||||| Sbjct 233 AGAGCATATGACTTTATATCTC-AGGAGTAAAGGCTGCAGAGGACCCAGAGTTTGAGACA 175 Query 153256 TTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGAC 153315 |||||||| ||||| || || | || |||||| | ||| ||| ||||| || Sbjct 174 TTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTATGGATGGCAGTCCAAGAA 115 Query 153316 CAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAAC 153366 |||||||||||||||||| |||||||| || ||| | ||| |||||||| Sbjct 114 CAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAGAGGCAAC 64 >seq9616 Length=845 Score = 214 bits (236), Expect = 2e-50 Identities = 375/544 (69%), Gaps = 4/544 (1%) Strand=Plus/Plus Query 151280 GGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATG 151339 || ||||| |||| ||||| ||||| || |||||| ||| || ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 151340 CTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCT 151399 | || ||||||||||| |||| |||| | ||||| || ||||| || | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 151400 GGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTG 151459 | ||| ||||| ||||| || ||| || ||||| || || |||| ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 151460 GTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 151519 || ||||| | | | || | || | || || | ||||| || | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 151520 GAGACCTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCT 151579 ||||| || | ||| || ||||| || ||||||||| | || || ||||| ||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 151580 TCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATC 151639 ||| ||||| || | | ||||||||||| ||||||||||| || | ||||| Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 151640 TGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAAC 151699 |||||||| | || || || || ||||| || ||| | || ||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 151700 CAGTCCATCATGGATGGTCAG--GGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACC 151757 | || | || | |||| || | | | ||||| ||||| ||| | || || Sbjct 428 GAATC--ACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 151758 GTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACC 151817 | |||| || ||||||||||| ||||| ||| | ||||| ||||||||||| || || | Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATC 545 Query 151818 TTGC 151821 | || Sbjct 546 TAGC 549 >seq15666 Length=534 Score = 165 bits (182), Expect = 9e-36 Identities = 361/534 (68%), Gaps = 9/534 (2%) Strand=Plus/Plus Query 151280 GGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTAC-AT 151338 || ||||| |||| ||||| ||||| || |||||| ||| || ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 151339 GCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGC 151398 | | || ||||||||||| ||||||||| | |||||||| ||||| || | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 151399 TGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCT 151458 | ||| || || ||||| || ||| || ||||| || || |||| ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 151459 GGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 151518 || ||||| | | | || | || | || || | | | || || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 151519 AGAGACCTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGC 151578 ||||| || | ||| || ||||| || ||||||||| | | || ||||| |||| Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 151579 TTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTAT 151638 | ||| ||||| || | || ||||||||||| ||||||||||| || | ||||| Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 151639 CTGGTTCACTGCACTTGGTGTCAGC-ACCATGGCATTCAACCTGAACGGTTTCAACTTCA 151697 |||||||| | || || | || | || ||||| || ||| | || | | | ||| Sbjct 364 ATGGTTCACCTCTCTAGGAG-CATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCA 420 Query 151698 ACCAGTCCATCATGGATGGTCAG--GGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAA 151755 | | || | || | |||| | | | | ||||| ||||| ||| | || || Sbjct 421 ATGAATC--ACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAA 478 Query 151756 CCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCC 151809 | |||| || ||||||||||| ||||| ||| | ||||| ||| ||||||| Sbjct 479 TAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 138 bits (152), Expect = 1e-27 Identities = 223/319 (70%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 151505 TTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTC 151564 ||||| || || || ||||| || | ||| || ||||| || ||||||||| | || Sbjct 613 TTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTA 554 Query 151565 ATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGG 151624 || |||||||||| | ||| ||||| || | || ||||||||||| ||||||||| Sbjct 553 ATATTCCAATACGGTAGCTTTAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGG 494 Query 151625 CCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAAC 151684 || || | ||||| |||||||| | || || || || ||| | || ||| | || Sbjct 493 CCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAAT 434 Query 151685 GGTTTCAACTTCAACCAGTCCATCATGGATGGTCAG--GGCAAAGTCCTGAACACCTGGG 151742 || | |||||||| | || | || | |||| || | | | ||||| |||| Sbjct 433 GGCCTGAACTTCAATGAATC--ACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGG 376 Query 151743 CAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACA 151802 | ||| | || || | |||| || ||||||||||| ||||| ||| | ||||| ||| Sbjct 375 CCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACG 316 Query 151803 ACTTCCCTCTCGACCTTGC 151821 ||||||| || || || || Sbjct 315 ACTTCCCACTAGATCTAGC 297 >seq14874 Length=573 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 9773 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 9832 |||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 499 GGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGCGGTTCGATC 440 Query 9833 CCGCTATTCTCCA 9845 |||||| ||||| Sbjct 439 CCGCTAGGCTCCA 427 >seq433 Length=8178 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 148133 GGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAATC 148192 |||||||||| ||||||||||||||| ||||||| | || |||||||||||||||| Sbjct 584 GGGTGTAGCTCAGCTTGGTAGAGCGCGGTCTTTGGGTGGCCGAAGTCGCAGGTTCAAATC 525 Query 148193 CTGCCACCCCGATTT 148207 ||| ||||| || || Sbjct 524 CTGTCACCCTGACTT 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549508511368440