Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq8156 215 1e-51 seq1156 185 2e-42 seq9045 107 5e-19 seq8794 84.2 6e-12 >seq8156 Length=952 Score = 215 bits (238), Expect = 1e-51 Identities = 269/369 (73%), Gaps = 0/369 (0%) Strand=Plus/Minus Query 37144 GAAAATCACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAG 37203 || || ||||||||||| || ||| | | ||||| || || || || ||||||||| || Sbjct 831 GAGAACCACTTCGGCGCCAATGTGTGGCTGACCCGGAAGGGGGCCGTGCGGGCCCGCAAG 772 Query 37204 GGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAG 37263 || |||||||||||||| || ||||||||||| ||| |||||||||||| || |||||| Sbjct 771 GGTGACCTGGGCATCATTCCGGGCTCGATGGGCGCGCGGTCATTCATCGTGCGGGGCAAG 712 Query 37264 GGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCC 37323 || || | | || ||| ||| ||| |||||| ||||| || | ||| ||||| | Sbjct 711 GGCAACGACCAGTCCTTCCACTCCTGCTCCCACGGGGCCGGGCGGGTCATGTCCCGGGGC 652 Query 37324 GAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGC 37383 || || || || || || | | || || ||| || ||| |||| |||||||| Sbjct 651 GAGGCCAAGCGGACCTTTACCTTGGCCGACCACCGGGCCGCGACCGAAGGCGTCGAGTGC 592 Query 37384 CGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTC 37443 ||||| || || || ||||| || ||||| ||| || ||||||||||| |||||| Sbjct 591 CGCAAGGACAAGGACGTCATCGATGAAACGCCGATGGCCTATAAGGACATCGACGCGGTC 532 Query 37444 ATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTG 37503 |||||||| || ||| || || || | | |||||| ||| || || | |||||| Sbjct 531 ATGGCCGCCCAGGCCGAACTTGTCGATGTGGAGCACACCCTGAAACAGGTGCTCTGCGTG 472 Query 37504 AAGGGTTGA 37512 || || ||| Sbjct 471 AAAGGCTGA 463 >seq1156 Length=3943 Score = 185 bits (204), Expect = 2e-42 Identities = 263/366 (72%), Gaps = 3/366 (1%) Strand=Plus/Minus Query 37148 ATCACTTCGGCGCAAACGTGCTGGTT-ACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGC 37206 ||||||| || || | || |||| | |||||||| || || || || |||||||| Sbjct 1418 ATCACTTTGGGGCCGAAGT-CTGGCTGACCCGCAAGGGGGCCGTCTCTGCGCGCGAGGGT 1360 Query 37207 GACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGA 37266 || ||||| || || || || |||||||| || ||||| |||||||| ||||||||||| Sbjct 1359 GAGCTGGGGATTATTCCCGGGTCGATGGGGGCCAAGTCCTTCATCGTGCGCGGCAAGGGC 1300 Query 37267 AATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAA 37326 | || || |||||||| ||| ||| || || || |||| |||| |||| | ||| Sbjct 1299 CAGTCTGACAGCTTCTGCTCCTGCTCCCATGGGGCGGGGCGAA-GATGTCCCGGACTGAA 1241 Query 37327 GCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGC 37386 || || || ||||| | | ||||| ||||| |||| |||| ||||| Sbjct 1240 GCCAAGCGGACCTTCACGCTTGGCGATCACCGCAAAGCCACAGAAGGGGTCGAATGCCGT 1181 Query 37387 AAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATG 37446 ||||| | || ||||| |||||||| ||||| |||||||| ||||| | |||||| Sbjct 1180 AAAGACCAAGGCGTCATCGATGAGACGCCTGCGGCCTACAAGGATATCGACACCGTCATG 1121 Query 37447 GCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAG 37506 || ||||| ||| |||||||| | || |||||||| || || || || |||||| Sbjct 1120 GCGGCGCAGACCGATCTGGTGGAGGTGGTCCACACGCTCAAACAGGTTGTCTGTGTGAAG 1061 Query 37507 GGTTGA 37512 || ||| Sbjct 1060 GGATGA 1055 >seq9045 Length=882 Score = 107 bits (118), Expect = 5e-19 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 21062 ATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATC 21121 ||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||| Sbjct 733 ATGGCGACCCCTGCAGGATTCGAACCTGCGACCGTCCGCTTAGAAGGCGGGTGCTCTATC 792 Query 21122 CAGCTGAGCTACGGGGCCG 21140 || |||||||| ||||||| Sbjct 793 CAACTGAGCTAAGGGGCCG 811 >seq8794 Length=897 Score = 84.2 bits (92), Expect = 6e-12 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 21063 TGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCC 21122 ||||||||||| ||||| ||||||||| |||| | ||||||| | |||||||||| Sbjct 452 TGGCGACCCCGGCAGGACTCGAACCTGCAGCCGTCGGATTAGAAGTCCGGTGCTCTATCC 511 Query 21123 AGCTGAGCTACGGGGCCGATT 21143 || ||||||||||||||| || Sbjct 512 AGTTGAGCTACGGGGCCGTTT 532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139255781840924