Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq11540 113 1e-20 seq1217 96.9 1e-15 >seq11540 Length=733 Score = 113 bits (124), Expect = 1e-20 Identities = 223/328 (68%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 30064 CATCTGCATCTGCCCGTGCATGTCGACGATGATCTCTGTTGTGTAGCGGTCCTGACCGTC 30123 |||||||||||| |||| ||||| || | ||||| || ||||| |||||| || || Sbjct 494 CATCTGCATCTGGCCGTTGATGTCTACCACAATCTCGGTGGTGTATACGTCCTGCCCTTC 435 Query 30124 CTGCGCCTGCCACTTTCGAGTTCTGAGTGAACCCTCGACGTACAGTTGCTGACCCTTCTT 30183 | ||||||||| || ||| || ||| |||| |||| | ||| || Sbjct 434 TTTATTCTGCCACTTGCGGGTTTGCAGGCGACCTTCGATATACACCTTGGAACCTTTACG 375 Query 30184 TACGTGCTGCCCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGT 30243 | || ||| ||| | | ||||||| ||| ||||| | ||| || |||||||||||||| Sbjct 374 CAGGTACTGGCCGGCCACTTCCGCCACCTTGCCGAACAGCACAACCCGGTGCCATTCGGT 315 Query 30244 --GCGCTCCTGTTGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTG 30301 || | | | |||||| ||||| ||||| | || || ||| || ||| || Sbjct 314 TCTCGGTACCAT--CTGGCCAGTCTGGCGATCCTTGTAACTTTCATCGGTAGCCAGGTTG 257 Query 30302 ATGTTGGTCACCGCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTG 30361 | || ||||| ||||| || || ||||||| || ||||| || || | || Sbjct 256 AGATTCACAACCGCGTTGCCATTCGGGGTATAGCGGGTATCCGGATCCTGGCCCAGATTA 197 Query 30362 CCAACCAGAATGACTTTGTTAACGCCTC 30389 |||| ||||| || ||||||| ||||| Sbjct 196 CCAATGAGAATTACCTTGTTAATGCCTC 169 >seq1217 Length=3763 Score = 96.9 bits (106), Expect = 1e-15 Identities = 186/268 (69%), Gaps = 6/268 (2%) Strand=Plus/Minus Query 20907 ACACCCACGCCAACGGCATTGTTGCAAGTATCACCACGAATAGCGCAGGCA-TAATCCTC 20965 ||||||| || || || || |||| || || | || || || || | || || || Sbjct 542 ACACCCAAGCAAAAGGTATGCACACAAGCATTACAAAAAAAAGTGCTGGAAGTATTCGTC 483 Query 20966 TTGGCGCGTCTTTGGTAGAACTTGATTATACTTATACCGCCGCGTTCTTGATC-CTT-AA 21023 ||| | ||||||| |||||| || | ||||| | || | ||||| || ||| || Sbjct 482 TTG-CACGTCTTTCGTAGAAGTTAACGATACTAAAACG--CTTGTTCTCTATGTCTTCAA 426 Query 21024 TAAGAATCGTGGTTATCAGAAATCCACTTATTACAAAGAAAACATCAACTCCAACAAATC 21083 |||| || || || |||| | ||||| ||||||||||| ||||| || |||||||| | Sbjct 425 TAAGGATTGTTGTAATCAAGTAGCCACTGATTACAAAGAATACATCTACGCCAACAAACC 366 Query 21084 CTCCAGAGAATGACTTAAATCCGGCATGAAAAAGAATGACCGACAAAACTGCAATAGCGC 21143 | ||| || | | |||||| || || || ||||| || | | ||| |||| || | Sbjct 365 CCCCACTAAACAATTCAAATCCAGCGTGGAATAGAATAACTGGGACAACAGCAAGTGCTC 306 Query 21144 GGAGTCCGTCTATCTCTGGTCGATATTT 21171 | | ||||| || || | |||||||| Sbjct 305 GCAAGCCGTCAATTTCAGCGCGATATTT 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145609730807888