Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq8042 297 2e-75 seq9616 250 3e-61 seq15666 192 7e-44 seq10300 183 4e-41 seq1391 87.8 2e-12 >seq8042 Length=962 Score = 297 bits (328), Expect = 2e-75 Identities = 618/913 (68%), Gaps = 17/913 (2%) Strand=Plus/Minus Query 179047 GGGACAGCTTTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGT 179106 || ||| | ||||| || |||||| || |||||| | || || || || | ||||| Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 179107 GCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 179166 ||||||| | || ||||| || || || ||| || ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 179167 CTACTTTGGGGTCCTGAGTCTCAGGGGAATTTC-CAGCGGTGGTGCCAACTTGGGGGAC- 179224 ||| | ||||| || || | || || |||| || | || |||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAA----GATGAACACTTATGGGCTC 787 Query 179225 --TATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTC-GTC 179281 |||||| ||| | || | ||| ||| || | || || || || || | | Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGGC 728 Query 179282 AGTTTGAACTGGCACGTCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTC 179341 ||||||| | || | | || |||| ||||| |||||||| | || || || || | Sbjct 727 AGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCC 668 Query 179342 CTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCT 179401 |||| ||| | | || || |||| ||||| | || |||||| |||||||| Sbjct 667 CTATAATACTATACATATCAGTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTCT 608 Query 179402 TTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCC 179461 |||| || | ||| ||||| || ||||| || ||||| || ||| ||||||| || | Sbjct 607 TTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTTC 548 Query 179462 ACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTC 179521 |||| ||||| || ||||| || || ||||||||| | ||||| ||| |||| | |||| Sbjct 547 ACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCTC 488 Query 179522 TGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAG 179581 | | || ||||| ||||| | || |||| || || | ||| ||||||| |||| Sbjct 487 TTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGG---TCAAG 431 Query 179582 CAAACACA---TTTAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTA 179638 | ||||| || | | | ||| | |||||| |||||||| || |||||| | | Sbjct 430 CTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAA 371 Query 179639 CAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCC 179698 |||| || | || ||||| || | |||| || | ||| ||||||| | ||| | | Sbjct 370 CAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTC 311 Query 179699 ACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTG 179758 ||||||| || || || || || || | ||| ||||||||| || || || | Sbjct 310 ACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAG 251 Query 179759 GGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAG 179818 | ||||| | || ||| | || ||||| ||| | ||| ||| | | || ||||| | Sbjct 250 GACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAGG 192 Query 179819 ATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTT 179878 | || ||||| ||||| |||||||| |||||||| || || |||||||| | ||| | Sbjct 191 ACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTAT 132 Query 179879 GGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTA 179938 || ||||| || ||||| ||||| |||||| ||||| || ||||| || || | Sbjct 131 GGATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAA 72 Query 179939 GTGGTAACGCACT 179951 | || ||| |||| Sbjct 71 GAGGCAACTCACT 59 >seq9616 Length=845 Score = 250 bits (276), Expect = 3e-61 Identities = 374/527 (71%), Gaps = 3/527 (1%) Strand=Plus/Plus Query 178017 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAA 178076 |||| |||||| || ||||| ||| || || |||| ||| | ||||||||||||||| Sbjct 26 GATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAA 85 Query 178077 CACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCT 178136 |||| || | ||||| || |||||||| | || || || | || ||||| |||||| Sbjct 86 CACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATCT 145 Query 178137 CTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAA 178196 || ||| ||||||||||||| | || ||||| || || | ||||| | | Sbjct 146 CTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGGA 205 Query 178197 ACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTC 178256 || | || | || | || || | |||||||| | || || ||||||| ||| Sbjct 206 TCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATCA 265 Query 178257 GCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATAT-GCATCGTTCAACAACTCCCG 178315 ||||| ||||| ||||| ||| | | || ||||| || | | | || |||||||| | Sbjct 266 GCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTT-AACAACTCAAG 324 Query 178316 TTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGG 178375 | ||||||||||| ||||||||||| ||| | || || ||||||||| | || || Sbjct 325 AAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGG 384 Query 178376 TGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGG 178435 ||||| || ||||| |||||| | ||||| | ||||||||| | || | | ||| Sbjct 385 AGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGACTC 444 Query 178436 ACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGA 178495 | |||| | | | | ||||||||||| ||| | || || | || | || || ||||| Sbjct 445 AGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGA 504 Query 178496 AGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATCTTGCA 178542 ||| ||||| || || ||| ||||| |||||||| || ||||| ||| Sbjct 505 AGTAATGCATGAGAGGAAT-GCACACAACTTCCCACTAGATCTAGCA 550 >seq15666 Length=534 Score = 192 bits (212), Expect = 7e-44 Identities = 353/514 (69%), Gaps = 4/514 (1%) Strand=Plus/Plus Query 178017 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTAC-ATGCTTGTATTCCAAGCAGA 178075 |||| |||||| || ||||| ||| || || |||| ||| | |||||||||||||| Sbjct 22 GATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAGA 81 Query 178076 ACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATC 178135 |||||| || | |||||||| |||||||| | || || || | || || || ||||| Sbjct 82 ACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGATC 141 Query 178136 TCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGA 178195 ||| ||| ||||||||||||| | || ||||| || || | ||||| | Sbjct 142 TCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACACTTGG 201 Query 178196 AACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGT 178255 | || | || | || | || || | | | ||| || || || ||||||| ||| Sbjct 202 ATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATATC 261 Query 178256 CGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCG 178315 ||||| ||||| ||||| ||| | || ||||| || | || |||||||| | Sbjct 262 AGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCAAG 321 Query 178316 TTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGG 178375 || ||||||||||| ||||||||||| ||| | || || ||||||||| | || || Sbjct 322 AAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGG 381 Query 178376 TGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGG 178435 | ||| || ||||| |||||| | |||| | | |||| | || | | ||| Sbjct 382 AGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGACTC 439 Query 178436 ACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGA 178495 | ||| | | | | ||||||||||| ||| | || || | || | || || ||||| Sbjct 440 AGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGA 499 Query 178496 AGTCATGCACGAAAGAAATAGCACATAACTTCCC 178529 ||| ||||| || || ||| ||||| ||||||| Sbjct 500 AGTAATGCATGAGAGGAAT-GCACACGACTTCCC 532 >seq10300 Length=803 Score = 183 bits (202), Expect = 4e-41 Identities = 291/415 (70%), Gaps = 2/415 (0%) Strand=Plus/Minus Query 178128 GGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAG 178187 || |||||||| ||| ||||||||||||| | || ||||| || | | || ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 178188 ACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATAT 178247 || | | || | || | || | || || | |||||||| || || || |||||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 178248 AACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAAC 178307 | ||| ||||| ||||| ||||| ||| | | || |||||||| | || ||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 178308 AACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACC 178367 ||||| | || ||||||||||| ||||||||||| ||| | || || ||||||||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 178368 GCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATC 178427 | || || ||||| || ||| | |||||| | ||||| | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 178428 CTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTC 178487 | ||| | |||| | | | | ||||||||||| ||| | || || | || | || Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 178488 GGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATCTTGCA 178542 || |||||||| ||||| || || ||| ||||| ||||||| || ||||| ||| Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAAT-GCACACGACTTCCCACTAGATCTAGCA 296 >seq1391 Length=3406 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 155267 TGCGAGTGTAGTTCAGTGGTAGAACGTTAGCCTTCCAAGCTAAATGTCGTCGGTTCAAGT 155326 |||| |||||||||||||||||||||| ||| | ||||||| ||||||| |||||| ||| Sbjct 2411 TGCGGGTGTAGTTCAGTGGTAGAACGTCAGCTTCCCAAGCTGAATGTCGCCGGTTCGAGT 2352 Query 155327 CCGATCTCTCGCTCTTTATAA 155347 ||| || | |||| | |||| Sbjct 2351 CCGGTCACCCGCTTTCGATAA 2331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605541698185320