Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3858 120 2e-21 seq1978 86.0 5e-11 >seq3858 Length=1591 Score = 120 bits (132), Expect = 2e-21 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 282321 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 282380 |||||| | | ||||||||| || || || | || ||||| ||||| || || || | Sbjct 412 CTTTGTTCTCGCCTTTATCAAGGCCGTAAGCCAGCGCCGCAGCGGTTGGCTCGTTGATGA 353 Query 282381 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 282440 | | || ||| | ||| |||||||| | || |||||||| || || || | |||| || Sbjct 352 TCCGCAGAACTTCAAGGCCAGCAATCTTACCGGCATCTTTGGTTGCCTGACGCTGTGCAT 293 Query 282441 CGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGC 282500 ||||||| ||||| ||||| ||||||||||| | || ||||| | || | ||| ||| Sbjct 292 CGTTAAAGTATGCCGGAACCGTAATAACGGCCTGCGTAACTTCACTGCCCAGATA--CGC 235 Query 282501 TT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 || || |||| |||||| || | | || | | |||||||| || Sbjct 234 TTCAGCGGTTTCTTTCATCTTCGTCAGGATGAAAGCTGAAATTTCTT 188 >seq1978 Length=2579 Score = 86.0 bits (94), Expect = 5e-11 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 |||||||| | ||| || || | || ||||||||||| || || ||||| | ||| Sbjct 132 TTTTTATCCATACCGTAAGCCAGCGCCGCAGCAGTTGGCTCGTTGATAATCCGTTTTACA 191 Query 282392 T-TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 | |||| |||||||| | ||||| |||||||| || || | || | ||| ||||| || Sbjct 192 TCTAAG-CCAGCAATCCGGCCTGCGTCTTTAGTTGCCTGACGCTGAGCATCATTAAAGTA 250 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACT 282481 || || || ||||| || || |||||||| Sbjct 251 CGCTGGTACGGTAATTACTGCTGCTGTTACT 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739816539354402