Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq14329 100 3e-16 seq5839 82.4 7e-11 seq5379 82.4 7e-11 >seq14329 Length=599 Score = 100 bits (110), Expect = 3e-16 Identities = 136/187 (73%), Gaps = 7/187 (4%) Strand=Plus/Plus Query 115276 TGCCAGTGCATACTCTTCCTTTGTCTCTGGGTGCAGGTACACCGGGAAGGCAGCGCCGTG 115335 |||||| ||||| ||||| |||||||| || ||||| ||||||||||| || |||| Sbjct 380 TGCCAGGGCATATTCTTCTTTTGTCTCAGGATGCAGAAACACCGGGAAGTCACTGCCGAC 439 Query 115336 CGGCATACCGAACCC--CAGAGACAGCATTTCTTCATGGGTTGAGCCAACAACCACGTAA 115393 |||| | | | || | | ||| |||||| ||| | |||| ||| || ||||| | Sbjct 440 CGGCGT---GTATCCTTCTGCGAC--CATTTCCTCAGGCGTTGCGCCGACCACCACCCAG 494 Query 115394 TCACGGTCCTTGCTCGGAACACCCATCAGTTCATCGCGGACTGCTCCGCCGACCAAATAA 115453 || || ||||| ||| | ||| | | || ||||| ||||| || ||||||||||| Sbjct 495 TCGCGATCCTTAACCGGGATACCAAGTAATTTGTCGCGCACTGCGCCACCGACCAAATAG 554 Query 115454 ATTTTCA 115460 |||||| Sbjct 555 GTTTTCA 561 >seq5839 Length=1196 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 148140 TTAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGAAGGTCGCGGGTTCGAACCCTGCA 148199 ||||||||||||||||||||||||| || ||||||| |||||| |||||||| |||||| Sbjct 668 TTAGCTCAGTTGGTAGAGCAACTGACTTTTAATCAGTGGGTCGCAGGTTCGAATCCTGCA 609 >seq5379 Length=1267 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 148140 TTAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGAAGGTCGCGGGTTCGAACCCTGCA 148199 ||||||||||||||||||||||||| || ||||||| |||||| |||||||| |||||| Sbjct 158 TTAGCTCAGTTGGTAGAGCAACTGACTTTTAATCAGTGGGTCGCAGGTTCGAATCCTGCA 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485928088757280