Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq3177 196 2e-44 seq3643 118 3e-21 >seq3177 Length=1826 Score = 196 bits (216), Expect = 2e-44 Identities = 550/833 (66%), Gaps = 25/833 (3%) Strand=Plus/Plus Query 188763 TAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGC 188822 |||| || | ||| |||| ||||||||| |||||||| | | || |||| |||| Sbjct 638 TAATATTTTGTTAATTGGTCCTACTGGTAGTGGTAAAACTCTGCTGGCAGAAACCCTGGC 697 Query 188823 TGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTA 188882 ||||| |||||||| | | || | |||||||| | ||||| ||||||||||| Sbjct 698 CCGGCTGTTAGATGTACCTTTCACCATGGCCGATGCAACAACCTTAACTGAAGCTGGTTA 757 Query 188883 TGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATAT 188942 || || |||||||| |||||| | | | || | ||| | ||||||||| | Sbjct 758 CGTTGGGGAAGATGTCGAAAACATTATTCAGAAACTACTGCAAAAATGCGATTACGATGT 817 Query 188943 CGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATC 189002 ||| ||| | || || ||||| |||||||||||| | || |||||| | | ||||| Sbjct 818 TGAAAAAGCTCAGCGCGGTATTGTCTATATCGATGAAATTGACAAAATTTCCCGTAAATC 877 Query 189003 AGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAA 189062 || | | | || |||||||| |||||||| || ||||| || || || || || | || Sbjct 878 TGATAACCCTTCTATTACCCGTGATGTATCGGGTGAAGGGGTGCAACAGGCGTTGCTGAA 937 Query 189063 AATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCA 189122 | ||||||||||| |||| ||| || || |||||||||||||| || || || || Sbjct 938 GTTGATTGAAGGTACTATTGCCTCAGTACCACCGCAAGGTGGTCGTAAGCATCCGCAACA 997 Query 189123 AGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGG 189182 |||| | | | |||| || |||| || |||||||| || || || || | || Sbjct 998 AGAATTTTTACAGGTAGACACCTCTAAAATTCTGTTTATTTGCGGCGGCGCCTTCGCCGG 1057 Query 189183 TCTTGAAAACATTA-TCAAGA--GACGCGCTACAAAATCAACTTTAGGTTTTGATGATAG 189239 || || || | | | || | | |||||| | | | ||||| | || | Sbjct 1058 ACTGGATAAAGTGATTGAACAACGCAGCGCTAAAGGTGCGGGCATTGGTTTCGGTGCAA- 1116 Query 189240 TGTAGATAA-AGTACAAGAAGAAATCA-----AGGATGACAATAAAGTATTCCAACATCT 189293 || ||| |||| |||||| || || || | | | ||| | | | Sbjct 1117 --CAGTTAAGAGTA----AAGAAAGCACCCGTAGCCTG--AGTGAGTCATTTCGTGACGT 1168 Query 189294 TCAACCGCAAGATATTGTTAAGTATGGTTTAATTCCAGAATTTATTGGGCGTGTACCAGT 189353 | | ||| ||||| | ||||| || ||||| ||||| || |||||||| || | || || Sbjct 1169 TGAGCCGGAAGATCTGGTTAAATACGGTTTGATTCCGGAGTTTATTGGCCGGCTGCCGGT 1228 Query 189354 AATCGCAACTCTTAACAAACTTGATCGAGATGCATTGATTAACATTTTAACTGAGCCGCA 189413 | |||| || || | | || ||| ||||| || | | ||| | | | |||| | Sbjct 1229 AGTCGCTACCCTGACTGAGCTGGATTTGGATGCTTTAGTGCAAATTCTGAGTCAGCCAAA 1288 Query 189414 AAACGCTATCATTAAACAATAT-CAGAAATTGTTAGATATGGATGGCGTGGAATTAGAAT 189472 ||| || | | ||||||| | ||| ||||| | ||||| || || | |||| Sbjct 1289 AAATGCGCTGGTAAAACAATTTGCAG-CGTTGTTCAAAATGGAAAATGTTGAGCTGGAAT 1347 Query 189473 TCCAAAAAGAAGCATTAGAATCAATTG--CAGATGAAGCGATTGAACGT-AATACTGGTG 189529 ||| | || || ||| || | |||| |||| |||| || || ||| || || |||| Sbjct 1348 TCCGGGACGATGCTTTAAAAGCCATTGGTCAGA--AAGCAATGGAGCGTAAAAACCGGTG 1405 Query 189530 CTCGCGGATTACAATCCATTATTGAAAATATTATGTTAGATGTAATGTATGAA 189582 | || || |||| || ||| |||| | | || | ||| ||||||||| Sbjct 1406 CCCGGGGCTTACGGTCAATTGTTGAGGGTGTGTTGCTCGATACTATGTATGAA 1458 >seq3643 Length=1651 Score = 118 bits (130), Expect = 3e-21 Identities = 224/330 (68%), Gaps = 0/330 (0%) Strand=Plus/Plus Query 188869 ACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCA 188928 || ||||| || || || ||||||||||| |||||| | | || | | || || Sbjct 281 ACCGAAGCCGGCTACGTCGGTGAAGATGTCGAAAACATCATCCTCAAACTGCTTCAGGCG 340 Query 188929 GCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAA 188988 |||| || || | || ||| | || || || || |||||||| ||||| || || Sbjct 341 TCTGAGTATAATGTGGAGCGTGCGCAGCGCGGCATCGTCTATATCGACGAAGTCGACAAG 400 Query 188989 ATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAG 189048 || | | || || || | | | ||||| || || |||||||| || || || || || Sbjct 401 ATCACGCGCAAGTCCGACAACCCCTCCATCACGCGGGATGTATCGGGTGAGGGCGTGCAA 460 Query 189049 CAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGT 189108 |||||| | || || ||||| ||||| || || || || || || |||||||| || Sbjct 461 CAAGCTCTGTTGAAGATCATGGAAGGCACCGTCGCCTCCGTCCCGCCCCAAGGTGGGCGC 520 Query 189109 AAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGT 189168 ||||| || || || ||| | || || | || ||||| || ||| |||| || ||| Sbjct 521 AAACATCCGCAGCAGGAATTCCTGCAAGTGGACACAACGAACATCCTGTTCATCTGTGGC 580 Query 189169 GGAGCGTTTGATGGTCTTGAAAACATTATC 189198 || || || | || || || || || ||| Sbjct 581 GGCGCCTTCGCGGGCCTCGACAAGATCATC 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591572289672896