Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_024367.1 Length=75028 Score E Sequences producing significant alignments: (Bits) Value seq388 304 6e-78 seq341 273 1e-68 seq34 251 3e-62 seq13372 158 6e-34 >seq388 Length=8708 Score = 304 bits (336), Expect = 6e-78 Identities = 618/907 (68%), Gaps = 23/907 (3%) Strand=Plus/Plus Query 45634 GCCATACTTCTGACCACACATGAACAAGGCATCAGCCAATCCGGTCACACCCAAGCCTTG 45693 |||||| | |||| ||| || | ||||| |||| ||||| ||||||||||| Sbjct 1377 GCCATAGCGCAGACCTAGCATCAAAAGCGCATCCGCCAGCCCGGTTACACCCAAGCCGAT 1436 Query 45694 GCGACGCTTGAAGCGTGCTTCGTCTCGTTGTGCTTCCAGAGGGAAGAGGCTGGTTTCAAC 45753 ||| || ||| |||| || | || || || |||| || || | || || || Sbjct 1437 GCGCCGTTTGGCATGTGCCTCCGCCCGCTGCGCCTCCAACGGAAACCGCGAGGCGTCCAC 1496 Query 45754 CACACTGTCCAGAATACGAACACCAGTCCGTACTGATTCTTCCAGCGCATTCATGTTCAT 45813 || |||||| || || || | ||| || ||| | |||||| | || | || Sbjct 1497 AACGTTGTCCATCATCCGCACGGCGGTCGCGACCAGTTCGTTCAGCGCGTCCAGATCCAA 1556 Query 45814 CTCTGCCTG-TCCTTTGACGAACGGGAAGACGACATGCTTTGCCAGATTCACTGAACCAA 45872 | ||| |||| |||||||| || || |||| || | || || | Sbjct 1557 AGCGGCCGCATCCT----CGAACGGGTCCGTCACCAGCCGCGCCATGTTGATCGACCCCA 1612 Query 45873 GCAGACAGGCACCATACGGAGGCAGAGGCTGCTCACCACATGGATTCGTTGCTGCAATGG 45932 |||| ||||||||||| || ||||| || || |||||||| || || || || || |||| Sbjct 1613 GCAGGCAGGCACCATAGGGCGGCAGGGGTTGTTCACCACAGGGGTTTGTCGCCGCGATGG 1672 Query 45933 TTTCAAGGAACCAGAGATTGTTCTCCTTGTTGATGCGATCAATGAAGATCACACCGGGTT 45992 | || | | | || ||||| ||| ||||| || || || |||||||| ||||||| Sbjct 1673 TCTCGACATAGCTCAGGTTGTTGGCCTGATTGATCCGGTCGATAAAGATCACGCCGGGTT 1732 Query 45993 CAGCGTAGTTGTAGGT-GTTC-CATAGAATCGCTTCCCAGAGATCCTTTGCTTTGATGGT 46050 | || || | ||||| | | ||| || || |||| | ||||| ||| | | || Sbjct 1733 CGGCATAATCATAGGTCGCGCGCAT-GACGCGGTTCC-ACAGATCGCGTGCCTGCACAGT 1790 Query 46051 GTCGTAGACCTTACCATCGAACATCAGATCCCA------GTCAGAATCATGAGCCACCGC 46104 | ||||||||| || || || | || |||||| ||| | || ||| |||| Sbjct 1791 GCGGTAGACCTTGCCGTCAAAGACCAAATCCCATGACCCGTCCG--TCTTGA----CCGC 1844 Query 46105 TTCCATGAACTCATCAGTACAGAGCACTGACACGTTGAAGTTACGAAGACGCAGAGGATC 46164 |||||| || ||||| || |||||| |||| |||||| | || || || | ||| Sbjct 1845 TTCCATAAAGTCATCCGTGACGAGCACCGACAGGTTGAACATGCGCAGCCGTGCCGCATC 1904 Query 46165 CTGCTTGGCTTGGACGAATTCCATGATGTCCGGATGGTCACACCGCATGGTGGCCATCAT 46224 | |||||| || ||| ||| ||| ||||| || || || ||||| || |||||||| Sbjct 1905 CGCCTTGGCCCCGATGAAATCCTCGATATCCGGGTGATCGCAGCGCATCGTCGCCATCAT 1964 Query 46225 AGCACCCCGTCGGCTGCCTGCTGACATGATGGTTTTGCACATCGAGTCCCAGACATCCAT 46284 ||||| || || ||||| ||||||||||| |||||||| |||||| |||||||| Sbjct 1965 CGCACCGCGCCGCGACCCTGCCGACATGATGGTGCGGCACATCGCGTCCCACACATCCAT 2024 Query 46285 GAATGTGAGAGGACCGCTGG-AGAAGCTCTCCACGCCCTTCACAGGTGCTCCCTTCGGAC 46343 ||| | | || || || | || | |||| || || || ||| ||||| || | Sbjct 2025 GAAGGACAATGGCCCCGAGGCATCCGC-CGCCACACCTTTGACCCCTGCCCCCTTGGGCC 2083 Query 46344 GAAGGGTACTGAAGTCATAACCAATCCCACCGCCTTGCTGCATCGTGAGAGCAGCTTCCT 46403 | | || ||||| ||||| || ||||| ||||| |||||||| || || ||||| || | Sbjct 2084 GGATCGTGCTGAAATCATAGCCGATCCCGCCGCCCTGCTGCATTGTCAGCGCAGCCTCTT 2143 Query 46404 TGAGCATATCGAAGATACCATCAAGGCTGTCAGGGATGGTTCCCATGACATAGCAGTTGA 46463 | ||||| ||||| || ||| | | |||||| ||||| || ||||| ||| ||||||||| Sbjct 2144 TCAGCATTTCGAAAATGCCACCCATGCTGTCTGGGATTGTGCCCATCACAAAGCAGTTGA 2203 Query 46464 ACAAGGTCACGTTGCGTCCCGTACCTGCACCGGAATTAATCCGTCCTGCTGGTAGGAACT 46523 ||| || || || |||| || ||||| | | || || || || || ||| | | Sbjct 2204 ACAGCGTTACCGAACGCGCCGTCCCCGCACCCGCTGTGATGCGGCCGGCGGGCAGGTATT 2263 Query 46524 TGAAATC 46530 ||||||| Sbjct 2264 TGAAATC 2270 Score = 114 bits (126), Expect = 6e-21 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 44993 ACGCTGAGGACGGATCCTGTCACGTCGTTTGGCCGATAGGTTGTGCAACCTTTACAGCCA 45052 || || || || || || ||||| ||||| || |||||||| ||||| ||||||||||| Sbjct 766 ACACTCAGCACAGACCCGGTCACATCGTTCGGACGATAGGTCGTGCAGCCTTTACAGCCG 825 Query 45053 GTTTCAAAGGCATGGTCATAGACCGCCTTGAAGTCTTCGAAGGAGATGTCTTCCGGAAGG 45112 || || || || | ||||| ||||||| | ||||| ||||||||| || | Sbjct 826 GTCTCGAACGCCTCCATGTAGACGTCCTTGAACGCCTCGAAACTGATGTCTTCGGGGCAG 885 Query 45113 TTGACAGTCTTGGAGATGGACGAGTCCACCCACTTCTGGAGAACAGCCTGCAt 45165 |||| ||||| ||||| || ||||||||||| ||||| |||||||||| Sbjct 886 TTGATCGTCTTTGAGATCGAAGAGTCCACCCATTTCTGCGCCGCAGCCTGCAT 938 >seq341 Length=9621 Score = 273 bits (302), Expect = 1e-68 Identities = 594/883 (67%), Gaps = 11/883 (1%) Strand=Plus/Plus Query 45652 CATGAACAAGGCATCAGCCAATCCGGTCACACCCAAGCCTTGGCGACGCTTGAAGCGTGC 45711 ||| ||||| ||||| |||||||||||||| |||| || ||| |||||| || || Sbjct 6478 CATCAACAACGCATCCGCCAATCCGGTCACGCCCAGTCCAATGCGCCGCTTGGCCCGCGC 6537 Query 45712 TTCGTCTCGTTGTGCTTCCAGAGGGAAGAGGCTGGTTTCAACCACACTGTCCAGAATACG 45771 || | || || || || || ||| | || |||||||| |||||| || || Sbjct 6538 CTCAGCGGCCTGCGCCTCTAGCGGAAAGCGTGAGGCATCAACCACGTTGTCCATCATCCG 6597 Query 45772 AACACCAGTCCGTACTGATTCTTCCAGCGCATTCATGTTCATCTCTGCCT-GTCCTTTGA 45830 || | |||| || | ||| || | | | || || ||| ||||| Sbjct 6598 CACGGCGGTCCCGACCAAGGAAACCAAAGCCTCCTCATCCAAATCCGCCCCGTCCT---- 6653 Query 45831 CGAACGGGAAGACGACATGCTTTGCCAGATTCACTGAACCAAGCAGACAGGCACCATACG 45890 | || || | || || |||| |||||| ||||| |||| |||||| ||||| | Sbjct 6654 CAAATGGCCGATCCACCAGCCGCGCCATATTCACCGAACCCAGCAAACAGGCCCCATAGG 6713 Query 45891 GAGGCAGAGGCTGCTCACCACATGGATTCGTTGCTGCAATGGTTTCAAGGAACCAG--AG 45948 | |||| || ||||| ||||| || |||||||| ||||| || || | || | || Sbjct 6714 GCGGCAAGGGTTGCTCCCCACAAGGGTTCGTTGCCGCAATCGTCTC--GCAATAATTCAG 6771 Query 45949 ATTGTTCTCCTTGTTGATGCGATCAATGAAGATCACACCGGGTTCAGCGTAGTTGTAGGT 46008 ||||| || |||||| || || ||||| ||||| || || || ||||| | | | || Sbjct 6772 GTTGTTGGCCGCGTTGATCCGGTCGATGAAAATCACCCCCGGCTCGGCGTATTCGAACGT 6831 Query 46009 GTTCCATAGAATCGCTTCCCAGAGATCCTTTGCTTTGATGGTGTCGTAGACCTTACCATC 46068 | | |||| | ||| ||||| || | | ||| ||| ||| || || Sbjct 6832 CGCCTGCATAATCCGGTTCCACAGATCACGCGCATCCAACGTGCGGTACACCCGCCCGTC 6891 Query 46069 GAACATCAGATCCCAGTCAGAATCATGAGCCACCGCTTCCATGAACTCATCAGTACAGAG 46128 |||| || |||||| || ||| |||||| ||||| || | || || | Sbjct 6892 AAACACCAAATCCCACGGAGCATCGGCCTTCACCGCCTCCATAAAGGCGTCCGTGACCAA 6951 Query 46129 CACTGACACGTTGAAGTTACGAAGACGCAGAGGATCCTGCTTGGCTTGGACGAATTCCAT 46188 ||| |||||||| | || || ||| || ||| |||||||| || || || || Sbjct 6952 CACGCTTACGTTGAACATGCGCAGCCGCGCCGGGTCCGACTTGGCTTCGATAAAGTCAAT 7011 Query 46189 GATGTCCGGATGGTCACACCGCATGGTGGCCATCATAGCACCCCGTCGGCTGCCTGCTGA 46248 ||||| || ||||| |||||||| ||||||||||| || ||||| ||| || || || Sbjct 7012 AATGTCGGGGTGGTCGCACCGCATCGTGGCCATCATCGCCCCCCGCCGGGACCCCGCCGA 7071 Query 46249 CATGATGGTTTTGCACATCGAGTCCCAGACATCCATGAATGTGAGAGGACCGCTGG-AGA 46307 ||| || || ||||||||| ||||| |||||||| || | | ||| || |||| | Sbjct 7072 CATAATAGTGCGGCACATCGAATCCCACACATCCATAAACGACAAAGGCCCACTGGCATC 7131 Query 46308 AGCTCTCCACGCCCTTCACAGGTGCTCCCTTCGGACGAAGGGTACTGAAGTCATAACCAA 46367 || | |||| ||| |||| || ||||| || || | ||| || || || || | Sbjct 7132 CGC-CGCCACACCCGTCACGCTCGCGCCCTTGGGCCGGATGGTCGAAAAATCGTAGCCGA 7190 Query 46368 TCCCACCGCCTTGCTGCATCGTGAGAGCAGCTTCCTTGAGCATATCGAAGATACCATCAA 46427 ||||||| || ||||||||||| || || || ||||| ||||| ||||| || || | | Sbjct 7191 TCCCACCACCCTGCTGCATCGTCAGCGCGGCCTCCTTCAGCATGTCGAAAATTCCGCCCA 7250 Query 46428 GGCTGTCAGGGATGGTTCCCATGACATAGCAGTTGAACAAGGTCACGTTGCGTCCCGTAC 46487 |||||| |||| || |||||||| | || |||||||| ||||| || | || | Sbjct 7251 TGCTGTCGGGGACCGTGCCCATGACGAAACAATTGAACAACGTCACCGACCGCGCAGTCC 7310 Query 46488 CTGCACCGGAATTAATCCGTCCTGCTGGTAGGAACTTGAAATC 46530 |||| || | |||| || || || || | |||||||||| Sbjct 7311 CTGCCCCCGCCGTAATGCGGCCCGCGGGCAAATACTTGAAATC 7353 >seq34 Length=41571 Score = 251 bits (278), Expect = 3e-62 Identities = 468/681 (69%), Gaps = 7/681 (1%) Strand=Plus/Minus Query 45853 TGCCAGATTCACTGAACCAAGCAGACAGGCACCATACGGAGGCAGAGGCTGCTCACCACA 45912 ||| ||||| | ||| || | |||||||| ||||| || || ||||| ||||| ||||| Sbjct 34239 TGCAAGATTGATTGATCCTAAAAGACAGGCGCCATAGGGCGGGAGAGGTTGCTCGCCACA 34180 Query 45913 TGGATTCGTTGCTGCAATGGTTTCAAGGAACCAGAGATTGTTCTCCTTGTTGATGCGATC 45972 ||||| || || ||| ||||| | ||||||||| | ||||||||||||||| Sbjct 34179 GGGATTGGTGGCGTGAATTGTTTCGCAATAGGCGAGATTGTTTTGCTTGTTGATGCGATC 34120 Query 45973 AATGAAGATCACACCGGGTTCAGCGTAGTTGTAGGTG--TTCCATAGAATCGCTTCCCAG 46030 |||||| || || ||||| || || ||| ||||||| ||||| || ||||| Sbjct 34119 AATGAAAATGACGCCGGGCTCCGCATAGGCGTAGGTGGCATCCAT--CATTTTGTCCCAC 34062 Query 46031 AGATCCTTTGCTTTGATGGTGTCGTAGACCTTACCATCGAACATCAGATCCCAGTCAGAA 46090 || || |||||||| || | ||| || |||||||| | || ||| || | Sbjct 34061 AGTGCCCGGGCTTTGATTGTTTTATAGGTTTTGCCATCGAAGACGAGCGGCCAATCGCGA 34002 Query 46091 TCATGAGCCACCGCTTCCATGAACTCATCAGTACAGAGCACTGACACGTTGAAGTTACGA 46150 || | ||||| ||||| || |||||| || || |||| |||||| | Sbjct 34001 TCTGCTTCGACCGCCTCCATAAAAGGATCAGTGACCAGTACCGACAGGTTGAACATGGTC 33942 Query 46151 AGACGCAGAGGATCCTGCTTGGCTTGGACGAATTCCATGATGTCCGGATGGTCACACCGC 46210 || ||| | ||||| || |||| || ||| ||| ||||| |||||| ||| | Sbjct 33941 AGCCGCCCGGCTTCCTGTTTTGCTTCGATGAAGTCCTCAATGTCTGGATGGGTGCACACC 33882 Query 46211 ATGGTGGCCATCATAGCACCCCGTCGGCTGCCTGCTGACATGATGGTTTTGCACATCGAG 46270 |||||||||||||| ||||| |||| || || ||||||||||| | |||||| | | Sbjct 33881 ATGGTGGCCATCATGGCACCGCGTCTTGATCCGGCAGACATGATGGTCTGGCACATGGCG 33822 Query 46271 TCCCAGACATCCATGAATGTGAG-AGGACCGCTGGAGAAGCTCTCCACGCCCTTCACAGG 46329 | |||||||||||| || | || || ||| || | || | | ||||| || || Sbjct 33821 TTCCAGACATCCATAAAGCTCAGCGGGCCCGATGCATCTGC-CCCAACGCCTTTTACTTC 33763 Query 46330 TGCTCCCTTCGGACGAAGGGTACTGAAGTCATAACCAATCCCACCGCCTTGCTGCATCGT 46389 || || || || || ||||| ||||||||| || || |||||||| |||||||| || Sbjct 33762 GGCACCTTTGGGTCGCAGGGTGGAGAAGTCATACCCGATGCCACCGCCCTGCTGCATGGT 33703 Query 46390 GAGAGCAGCTTCCTTGAGCATATCGAAGATACCATCAAGGCTGTCAGGGATGGTTCCCAT 46449 ||| || |||||||| | ||||| || ||| | | | ||||| | ||||| Sbjct 33702 GAGGGCGGCTTCCTTCAAGGCCTCGAAAATCCCACCCATGTCATCAGGTACATCGCCCAT 33643 Query 46450 GACATAGCAGTTGAACAAGGTCACGTTGCGTCCCGTACCTGCACCGGAATTAATCCGTCC 46509 ||| | || ||||| | ||| || |||| | || || || |||| | || || || Sbjct 33642 GACGAAACAATTGAAGAGGGTGACTGAGCGTTCGGTGCCAGCCCCGGCAACGATGCGCCC 33583 Query 46510 TGCTGGTAGGAACTTGAAATC 46530 || || | ||| ||||||| Sbjct 33582 GGCGGGCAAAAAC-TGAAATC 33563 >seq13372 Length=642 Score = 158 bits (174), Expect = 6e-34 Identities = 303/443 (68%), Gaps = 3/443 (1%) Strand=Plus/Minus Query 46100 ACCGCTTCCATGAACTCATCAGTACAGAGCACTGACACGTTGAAGTTACGAAGACGCAGA 46159 ||||||| |||||| ||| ||| | ||| |||| ||||| | || | ||| | Sbjct 569 ACCGCTTTCATGAAAGGATCGGTAATCAACACGGACATATTGAACATCCGCAACCGCGCA 510 Query 46160 GGATCCTGCTTGGCTTGGACGAATTCCATGATGTCCGGATGGTCACACCGCATGGTGGCC 46219 || || ||||| || ||| ||| | || || || || ||||||||||| ||| Sbjct 509 GGGTCAGATTTGGCCGCGATGAAATCCTCAACATCTGGGTGATCGCACCGCATGGTCGCC 450 Query 46220 ATCATAGCACCCCGTCGGCTGCCTGCTGACATGATGGTTTTGCACATCGAGTCCCAGACA 46279 ||||| ||||| || || || || ||||| || || ||||||| |||||| ||| Sbjct 449 ATCATCGCACCGCGGCGCGACCCGGCAGACATAATCGTGCGACACATCGCGTCCCATACA 390 Query 46280 TCCATGAATGTGAGAGGACC-GCTGGAGAAGCTCTCCACGCCCTTCACAGGTGCTCCCTT 46338 |||||||| | | || || | || | || | | || || | ||| || || || Sbjct 389 TCCATGAAAGACAACGGGCCAGATGCATCCGC-CGCGACACCATGCACGTCCGCGCCTTT 331 Query 46339 CGGACGAAGGGTACTGAAGTCATAACCAATCCCACCGCCTTGCTGCATCGTGAGAGCAGC 46398 || |||| ||| || ||||| ||||| || ||||| ||||||||||| | || || Sbjct 330 GGGGCGAATGGTGGAAAAATCATACCCAATGCCGCCGCCCTGCTGCATCGTCAACGCGGC 271 Query 46399 TTCCTTGAGCATATCGAAGATACCATCAAGGCTGTCAGGGATGGTTCCCATGACATAGCA 46458 || |||||||| || || || || | | |||||| || | || ||||||||| |||| Sbjct 270 CTCTTTGAGCATTTCAAAAATGCCCCCCATGCTGTCGGGCACAGTGCCCATGACAAAGCA 211 Query 46459 GTTGAACAAGGTCACGTTGCGTCCCGTACCTGCACCGGAATTAATCCGTCCTGCTGG-TA 46517 ||||| || || || || | ||||| || || | | ||||| || ||||| | Sbjct 210 ATTGAATAATGTAACAGACCGCGCTGTACCCGCGCCTGCCGTGATCCGGCCAGCTGGACA 151 Query 46518 GGAACTTGAAATCATACAGGGCT 46540 || | |||||||| | |||||| Sbjct 150 GGTATTTGAAATCCTCAAGGGCT 128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239916319386533