Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq71 89.7 2e-13 seq5502 80.6 8e-11 >seq71 Length=24584 Score = 89.7 bits (98), Expect = 2e-13 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 8569 GCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTGG 8628 ||||| |||||||||||||||||||||| | ||||||| | |||||| | || || ||| Sbjct 10110 GCGGGCGTGGTGGAATTGGTAGACACGCTAGATTTAGGTTCTAGTGCC-GCAAGGCGTGG 10052 Query 8629 GGGTTCGAGTCCCTCTACCCGCACCA 8654 |||||| ||||||| ||||||||| Sbjct 10051 GGGTTCAAGTCCCTTCGCCCGCACCA 10026 >seq5502 Length=1243 Score = 80.6 bits (88), Expect = 8e-11 Identities = 70/86 (81%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 8569 GCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTGG 8628 |||| | ||||| |||||||||||||||| | ||||||| | ||||| | ||| ||| Sbjct 706 GCGGCTGTGGTGAAATTGGTAGACACGCTGGTTTTAGGTACCAGTGCTT--TTAGCGTGG 649 Query 8629 GGGTTCGAGTCCCTCTACCCGCACCA 8654 |||||| |||||||| | |||||||| Sbjct 648 GGGTTCAAGTCCCTCCAGCCGCACCA 623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146147224980320