Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq9616 203 1e-47 seq15666 154 4e-33 seq10300 134 4e-27 >seq9616 Length=845 Score = 203 bits (224), Expect = 1e-47 Identities = 375/546 (69%), Gaps = 8/546 (1%) Strand=Plus/Plus Query 19946 GGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATG 20005 || || || || ||| |||| |||||| | ||||| || || ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 20006 TTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCT 20065 || ||||||||||| ||||| | |||| | ||||| || |||||||| | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 20066 GGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTT 20125 | ||| ||||| || || ||||||||||| ||||| || || | || || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 20126 GTGCGTGAGACTACT--GAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAGA 20181 | ||||| ||| || | || ||| || | || || | || || || | Sbjct 188 CTTGCAGAGAC-ACTTGGATCT---AACTCACTCAATTCAGGCTATATATTCGGACAGTA 243 Query 20182 AGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATA 20241 || ||||| |||| ||| ||| || ||||| |||||||| | | || ||||| || Sbjct 244 GGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTA 303 Query 20242 CGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGG 20301 | | || ||||| | ||||||||||||| || || ||||| || |||| Sbjct 304 CAGTAGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGG 363 Query 20302 GATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTT 20361 || |||||| | | | || || ||||||||||| ||||| | || ||| | ||||| Sbjct 364 TATATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTT 423 Query 20362 TAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAA 20421 ||| | || ||| | ||| | |||| | | ||| | || ||||| ||||| || || Sbjct 424 CAACGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAA 483 Query 20422 TCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGA 20481 | | || | || || | || || |||||||| ||||||| || ||||||||||| || Sbjct 484 TAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGA 543 Query 20482 CCTTGC 20487 || || Sbjct 544 TCTAGC 549 >seq15666 Length=534 Score = 154 bits (170), Expect = 4e-33 Identities = 360/537 (67%), Gaps = 11/537 (2%) Strand=Plus/Plus Query 19946 GGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTAC-AT 20004 || || || || ||| |||| |||||| | ||||| || || ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 20005 GTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGC 20064 ||| ||||||||||| ||||| |||||| | |||||||| |||||||| | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 20065 TGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCT 20124 | ||| || || || || ||||||||||| ||||| || || | || || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 20125 TGTGCGTGAGACTACT--GAACAGGAAAGTCA--GAACTATGGTTACAAGTTTGGGCAAG 20180 | ||||| ||| || | || ||| || | || || | | || || | Sbjct 184 ACTTGCAGAGAC-ACTTGGATC---TAACTCACTCAATTCAGGCTATATATGTGAACAGG 239 Query 20181 AAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAAT 20240 | || ||||| |||| ||| ||| || ||||| |||||||| | || ||||| | Sbjct 240 AGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGT 299 Query 20241 ACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAG 20300 ||| | || ||||| | |||||||||||||| || || ||||| || ||| Sbjct 300 ACGGTAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAG 359 Query 20301 GGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACT 20360 | || |||||| | | | || | ||||| ||||| ||||| | || | | | Sbjct 360 GTATATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCC 417 Query 20361 TTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCA 20420 | || | || ||| | ||| | | || | | ||| | || ||||| ||||| || | Sbjct 418 TCAATGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTA 477 Query 20421 ATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCAC 20477 || | || | || || | || || |||||||| ||||||| || ||||||||| Sbjct 478 ATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 134 bits (148), Expect = 4e-27 Identities = 220/317 (69%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 20171 TTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTG 20230 || || || || || ||||| |||| ||| ||| || ||||| |||||||| | | Sbjct 613 TTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTA 554 Query 20231 ATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGG 20290 || |||||||||| | || ||||| | ||||||||||||||| || || ||| Sbjct 553 ATATTCCAATACGGTAGCTTTAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGG 494 Query 20291 CCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAAC 20350 || || |||| || |||||| | | | || || ||||||||| | ||||| | || Sbjct 493 CCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAAT 434 Query 20351 GGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCT 20410 || | ||||| || | || ||| | ||| | |||| | | ||| | || ||||| Sbjct 433 GGCCTGAACTTCAATGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCC 374 Query 20411 GACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAAC 20470 ||||| || ||| | || | || || | || || |||||||| ||||||| || || Sbjct 373 GACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGAC 314 Query 20471 TTCCCACTTGACCTTGC 20487 |||||||| || || || Sbjct 313 TTCCCACTAGATCTAGC 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148799502771666