Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq9616 203 1e-47 seq10300 141 3e-29 >seq9616 Length=845 Score = 203 bits (224), Expect = 1e-47 Identities = 370/542 (68%), Gaps = 0/542 (0%) Strand=Plus/Plus Query 29074 GGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATG 29133 || ||||| ||| || || | ||||| | |||||| || |||||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 29134 CTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCT 29193 | || |||||||| ||||| | |||| | ||||| || |||||||| | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 29194 GGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTT 29253 | || ||||| || || ||||| ||||| ||||| || || | || || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 29254 GTGCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAA 29313 | ||||| || | | ||| | || | || || | || ||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 29314 GAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCT 29373 ||||| |||| ||| ||| || || || |||||||| | | || ||||| || | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 29374 TCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATT 29433 || || || | ||||||||||||| || || ||||| || |||| || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 29434 TGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAAC 29493 |||||| | | | || || ||||||||||| ||||| | || ||| | ||||| ||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 29494 CAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGC 29553 | || ||| | ||| | |||| | | ||||| || ||||| || | || ||| | Sbjct 428 GAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGA 487 Query 29554 GCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTG 29613 || |||| || | ||||||||||||||| | ||||| || ||||||||||| ||||| Sbjct 488 GCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTA 547 Query 29614 GC 29615 || Sbjct 548 GC 549 >seq10300 Length=803 Score = 141 bits (156), Expect = 3e-29 Identities = 280/413 (68%), Gaps = 1/413 (0%) Strand=Plus/Minus Query 29203 GGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGTGAG 29262 || || || ||||| ||||| ||||| || || | || || || || |||| ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 29263 ACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTAT 29322 || || | | ||| | || | || || | || ||||| || || ||||| ||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 29323 AACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAAT 29382 | ||| ||| || || || |||||||| | | || |||||||| | | || || Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 29383 AATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCT 29442 || | ||||||||||||||| || || ||||| || |||| || |||||| | Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 29443 GCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTT 29502 | | || || ||||||||| | ||||| | || || | ||||| || | || ||| Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 29503 CTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTC 29562 | ||| | |||| | | ||||| || ||||| || | || ||| | || |||| Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 29563 GGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 || | ||||||||||||||| | ||||| || |||||||||| ||||| || Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146636728601642