Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq9616 190 6e-44 seq15666 150 5e-32 seq9663 82.4 2e-11 >seq9616 Length=845 Score = 190 bits (210), Expect = 6e-44 Identities = 363/529 (69%), Gaps = 8/529 (2%) Strand=Plus/Plus Query 19177 TTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAG 19236 || || || | |||||| | ||||||||||| || ||||||| ||| | |||||||| Sbjct 20 TTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAA 79 Query 19237 GCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGC 19296 || ||||| | ||| | ||||| || |||||||| | || || || | ||| ||||| Sbjct 80 GCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGA 139 Query 19297 GGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCT-TGTGC-GTGAAA 19354 || || ||||| ||||| ||||| || || | || || || || || ||| | || | Sbjct 140 GGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACA 199 Query 19355 CTACTGAAGAGGTATCTCA--GAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTA 19412 || || || || |||| || | ||||| | || || || | || ||||| || Sbjct 200 CT--TG--GATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATA 255 Query 19413 TAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAA 19472 || ||| || || ||||| || |||||| | || || ||||||||| ||| || Sbjct 256 TAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAA 315 Query 19473 CAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGC 19532 ||| | |||| ||||| | || || ||||| || | || || ||||| | Sbjct 316 CAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCAC 375 Query 19533 CGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCT 19592 | | || || ||| || ||||| || ||||| ||||| | ||||| ||| | || || Sbjct 376 CTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACT 435 Query 19593 TCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCT 19652 | | ||| | |||| | | ||| | || ||||| ||||| || ||| | || |||| Sbjct 436 TGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCT 495 Query 19653 CGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGAT 19701 || | || |||||||| || | ||||| || ||||||||||| ||| Sbjct 496 AGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGAT 544 >seq15666 Length=534 Score = 150 bits (166), Expect = 5e-32 Identities = 353/525 (67%), Gaps = 11/525 (2%) Strand=Plus/Plus Query 19177 TTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAAC-TACATGCTTGTATTCCA 19235 || || || | |||||| | ||||||||||| || |||||| | ||| | |||||||| Sbjct 16 TTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCA 75 Query 19236 GGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGG 19295 || ||||| ||||| | |||||||| |||||||| | || || || | ||| || || Sbjct 76 AGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGG 135 Query 19296 CGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCT-TGTGC-GTGAA 19353 || || ||||| ||||| ||||| || || | || || || || || ||| | || Sbjct 136 AGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGAC 195 Query 19354 ACTACTGAAGAGGTATCTCA--GAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTT 19411 ||| || || || |||| || | ||||| | | || || || || ||||| | Sbjct 196 ACT--TG--GATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACAT 251 Query 19412 ATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCA 19471 ||| ||| || || ||||| || |||||| | | || |||||||||| ||| | Sbjct 252 ATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTA 311 Query 19472 ACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTG 19531 |||| | ||||| ||||| | || || ||||| || | || || ||||| Sbjct 312 ACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCA 371 Query 19532 CCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCC 19591 || | || || | | || ||||| || ||||| |||| | | | || | || | Sbjct 372 CCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCAC 429 Query 19592 TTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACC 19651 || | ||| | | || | | ||| | || ||||| ||||| || ||| | || ||| Sbjct 430 TTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACC 489 Query 19652 TCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCAC 19696 | || | || |||||||| || | ||||| || ||||||||| Sbjct 490 TAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq9663 Length=843 Score = 82.4 bits (90), Expect = 2e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 19132 GCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATG 19191 ||||| || || || ||| |||| || || | || ||||| || || || | |||| Sbjct 208 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 267 Query 19192 CCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATC 19251 || | ||||||||||| || || |||| | | | |||| ||| || ||||| ||||| Sbjct 268 CCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATG 327 Query 19252 CTCATGCACCCGTTCCAC 19269 ||| ||||||| |||||| Sbjct 328 CTCGTGCACCCATTCCAC 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141121014594066