Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq486 168 8e-37 seq44 118 1e-21 seq13573 109 6e-19 >seq486 Length=7659 Score = 168 bits (186), Expect = 8e-37 Identities = 225/313 (72%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967 ||||| |||||| |||| ||||||||| ||||| |||||| || || | ||||||| Sbjct 2654 AGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGCCGAAGGTGTGC 2713 Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAG 147027 || ||||||||| | || ||||| || || | ||||| || || | | ||| Sbjct 2714 ACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTCAGGATGGCGTAA 2773 Query 147028 CTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAC 147087 ||||| |||||||| || || || ||| || |||| |||| | |||||| |||||||| Sbjct 2774 CTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGGTAGAGCTGGCAG 2833 Query 147088 GAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 |||| ||| |||| ||||| |||||| |||| | ||||||||||||||| ||||| Sbjct 2834 CTCAGCTTGCCGCCGGCGACGTAGAACTGGAACAGCAGGTGGCACGGCGGCAGGGCCATC 2893 Query 147148 GCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC 147207 | || || || |||||| || ||| | |||||| | |||||||| | | Sbjct 2894 TGGTCGAGTTCGGCCACGTTCCACGCGCTGACAATCAGCCGGCGCGAGTCGGGGTTGCGC 2953 Query 147208 TTAATCTCTTCGA 147220 || |||| |||| Sbjct 2954 TTGATCTGATCGA 2966 >seq44 Length=32007 Score = 118 bits (130), Expect = 1e-21 Identities = 176/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 146941 TAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGG 147000 |||| ||||| ||||| | ||||| | || || ||| | || || ||||| || Sbjct 27933 TAGAGATGCGCATCCCCAAAAGTGTGGATGAACTCGCCCACTTCGAGCCCCGTCACCTGC 27874 Query 147001 GCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATG 147060 |||| ||| | |||||||| ||| ||| |||||||| || || |||| | || Sbjct 27873 GCCATCATCTGCAAGAGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCCAAGAACACA 27814 Query 147061 TCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCAC 147120 || | || | ||| || |||||||| || |||| ||||| ||||| || |||||| || Sbjct 27813 TCAGCGGAGCGCTGATAGAGCTGGCAGGAAAGCTTGCCGTCCGCCACATAGAACTGGAAC 27754 Query 147121 AGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACC 147180 || ||| || |||||||||||||| | |||||| ||||||||||| || Sbjct 27753 AGACAGTGACAGGGCGGCAGCGCCATATTATCTACGTCCGCCACATTCCAGGCCGACACG 27694 Query 147181 ACCAGCCGCC 147190 | |||||||| Sbjct 27693 ATCAGCCGCC 27684 >seq13573 Length=635 Score = 109 bits (120), Expect = 6e-19 Identities = 206/303 (68%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985 |||| ||||| | || | ||||||||| || | ||||| ||||| || ||||||| Sbjct 449 TCCAGATGGTTTATATACAAGTGCGCGTCGCCGAATGTGTGGACAAACTCTCCCGGCTCT 390 Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 | || || | | |||| ||| || |||| | ||| || || ||||| ||| Sbjct 389 AACCCTGTTGCTCGCGCCATCATCATCGTCAGCAAAGCATAGGATGCGATATTGAACGGG 330 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC 147105 || || ||| | || |||| | || || ||||| || |||| ||||| Sbjct 329 ACACCAAGGAAGACATCAGCCGAACGTTGATAGAGCTGACAATTTAGCTTTCCGTCCATA 270 Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 |||| |||||| ||||| |||||| |||||||||||||| |||||| ||| || || Sbjct 269 ACGTTAAACTGAAACAGGCAGTGGCATGGCGGCAGCGCCATATCGGGCACGTCAGCCGGA 210 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 ||||| || ||||| |||| |||| | || || | |||||||| || | ||| Sbjct 209 TTCCAAGCAGAGACGACCAAACGCCGCGAGTTTGGATTGGTTTTAATCTCGTCTAACACC 150 Query 147226 CAC 147228 ||| Sbjct 149 CAC 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583367093992800