Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq8042 282 5e-71 seq9616 251 8e-62 seq15666 185 1e-41 seq10300 168 7e-37 seq15657 82.4 9e-11 >seq8042 Length=962 Score = 282 bits (312), Expect = 5e-71 Identities = 624/926 (67%), Gaps = 31/926 (3%) Strand=Plus/Minus Query 161796 GGCACAACTTTCGCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGT 161855 |||||||| || | || || ||| || |||||| | || || || || | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 161856 GCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTT 161915 |||||| | ||||| |||||||||| |||||| | ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 161916 CTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTC 161975 || | ||||| || || || ||||| |||| | || |||| ||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAAC---ACTTATGGG-CTC 787 Query 161976 T----GGA-----ATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTC 162026 | ||| ||| | ||||| || ||| || | || || || | Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAAT-----CTTTGCAGTTATAGGCTTTTGTTTA 732 Query 162027 CGTCAGTTTGAACTGGCACGTCTTATTG-GTATCCGTCCCTACAATGCTATTGCGTTCTC 162085 | |||||||| | || | |||| | |||| ||||| ||||||||| | || ||| | Sbjct 731 AGGCAGTTTGAGATAGCCAG-CTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCAC 673 Query 162086 TGGTCCTAT--TGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGT 162143 || ||||| | || | | |||| || || | || ||||| || ||||| ||| | Sbjct 672 AGGCCCTATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCT 615 Query 162144 TGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAA 162203 ||||| || || || || ||| || ||||| ||||| || ||||| | || || ||| Sbjct 614 TGGTTCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAA 555 Query 162204 GGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGT 162263 || || || || ||||| || ||||| ||||||||||||||| | || || || | || Sbjct 554 GGCTTTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGA 495 Query 162264 GGAGCACTTCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTATACGAGGATGGA 162323 | ||| ||| |||| ||||| || || | |||||| | || || |||| | ||||| Sbjct 494 GCAGCTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGG- 436 Query 162324 GAACAAGCAAAC---ACCTTTAAGGCGTTTGATTCGACACAGGAGGAAGAGACTTATTCT 162380 ||||| || ||||| | | || | | || || || |||||||| ||| Sbjct 435 --TCAAGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCT 378 Query 162381 ATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGG 162440 ||| | || || || | |||||||| || | |||| | || ||||| || ||| | Sbjct 377 ATGCTAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGA 318 Query 162441 TGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGC 162500 |||||||| || ||| | | || || || || || | ||||| || ||||| || Sbjct 317 TGGCTTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGA 258 Query 162501 ATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCA 162560 || || || || || |||||||| | || || || || | ||||||| | | || Sbjct 257 ATAATAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCT 199 Query 162561 GCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTA 162620 ||||| || || |||||||| || ||||| ||||||||||| || || |||||||| | Sbjct 198 GCAGAGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATC 139 Query 162621 CGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTT 162680 ||| |||| | ||| || ||||| ||||||||||| ||||| || ||||| Sbjct 138 CGTTTATGGATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTA 79 Query 162681 CTTCCTAGAGGCAACGCCCTTTAATA 162706 ||||| ||||||||| | || || || Sbjct 78 CTTCCAAGAGGCAACTCACTATAGTA 53 >seq9616 Length=845 Score = 251 bits (278), Expect = 8e-62 Identities = 383/543 (71%), Gaps = 2/543 (0%) Strand=Plus/Plus Query 160401 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATG 160460 || ||||| |||| |||| |||||| || ||||| ||| || || |||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 160461 CTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCT 160520 | ||||||||||||||||||| || | |||||||| |||||||| | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 160521 GGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTC 160580 | || ||||| |||||| | ||| ||||||||| ||| | || ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 160581 GTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAA 160640 || || || || | | | |||| || | || |||| ||||| || |||| Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 160641 GAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATAT-GC 160699 ||||| || | ||| ||||| ||||| ||||| ||| | | || ||||| || | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 160700 ATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAAT 160759 | | || |||||||| | | ||||||||||| ||||||||||| ||| | || || Sbjct 308 AGCTTT-AACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 366 Query 160760 CTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 160819 |||||||| |||| || || || ||||| || ||| | || ||| | |||||||| Sbjct 367 ATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAA 426 Query 160820 CCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCG 160879 | | || | | || |||||| | || | ||||| ||||| ||| |||| ||| | Sbjct 427 CGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAG 486 Query 160880 TGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCT 160939 || | || ||||||||||| ||||||||| | || ||||||||||||||||| || || Sbjct 487 AGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCT 546 Query 160940 CGC 160942 || Sbjct 547 AGC 549 >seq15666 Length=534 Score = 185 bits (204), Expect = 1e-41 Identities = 362/533 (68%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 160401 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTAC-AT 160459 || ||||| |||| |||| |||||| || ||||| ||| || || |||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 160460 GCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGC 160519 | | |||||||||||||||||||| || | ||||| || |||||||| | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 160520 TGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACT 160579 | || || || |||||| | ||| ||||||||| ||| | || ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 160580 CGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGA 160639 || || || || | | | |||| || | || |||| | | || ||||| Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 160640 AGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGC 160699 ||||| || | ||| ||||| ||||| ||||| ||| | || ||||| || | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 160700 ATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAAT 160759 || |||||||| | || ||||||||||| ||||||||||| ||| | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 160760 CTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 160819 |||||||| |||| || | || ||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 160820 CCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCG 160879 | || | | || ||| || | || | ||||| ||||| ||| |||| ||| | Sbjct 422 TGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAG 481 Query 160880 TGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 160932 || | || ||||||||||| ||||||||| | || |||||| ||||||||| Sbjct 482 AGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 168 bits (186), Expect = 7e-37 Identities = 286/413 (69%), Gaps = 1/413 (0%) Strand=Plus/Minus Query 160530 GGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAA 160589 || |||||| | ||| ||||||||| ||| | || ||||| || | | || || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 160590 ACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGACCTAC 160649 || || | | | |||| || | || |||| ||||| || ||||| ||||| || Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 160650 AACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAAC 160709 | ||| ||||| ||||| ||||| ||| | | || |||||||| | || ||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 160710 AACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGTTCACT 160769 ||||| | || ||||||||||| ||||||||||| ||| | || || |||||||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 160770 GCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATC 160829 |||| || || || ||| | || ||| | || || | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 160830 CTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTGGTCTT 160889 | || |||||| | || | ||||| ||||| ||| |||| ||| | || | || Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 160890 GGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGC 160942 ||||||||||| ||||||||| | || |||||| |||||||||| || || || Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq15657 Length=537 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 160368 GCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATG 160427 |||||||| || |||||| | || || ||| | || ||||| |||| |||| |||| Sbjct 23 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 82 Query 160428 CCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACA 160482 || || ||||| ||| || || |||| ||| | ||||||||||||||||||| Sbjct 83 CCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559388063777400