Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq8042 284 1e-71 seq9616 262 5e-65 seq15666 208 9e-49 seq10300 187 3e-42 seq749 100 3e-16 seq547 98.7 1e-15 seq1391 95.1 1e-14 >seq8042 Length=962 Score = 284 bits (314), Expect = 1e-71 Identities = 619/916 (68%), Gaps = 23/916 (3%) Strand=Plus/Minus Query 182469 GGGACAGCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGT 182528 || ||| | ||||| || |||||| || || ||| | || || || | ||||| Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 182529 GCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 182588 ||||||| | || ||||| || || || ||| || ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 182589 CTACTTTGGGGTCCTGAGTCTCAGGGGAATTTC-CAGCGGTGGTGCCAACTTGGGGGACT 182647 ||| | ||||| || || | || || |||| || | || |||| ||| || Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAA----GATGAACACTTATGGG-CT 788 Query 182648 CT----GGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTA-GG 182702 || ||| ||| | || | ||| ||| || | || || || || ||| || Sbjct 787 CTTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGG 729 Query 182703 CAATTTGAACTTGCTCGCCTGATTGGAATCAGACCTTACAATGCGATTGCTTTTTCTGGT 182762 || ||||| | || || | | | || | || |||||||| | || || | || Sbjct 728 CAGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 182763 CCTAT--TGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGT 182820 ||||| | || || ||||||| || |||| || ||||| || || |||||||||| Sbjct 668 CCTATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 182821 TTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTT 182880 | || || || || ||| || || || |||||||||||||| | ||||| || || | Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 182881 TCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAG 182940 | ||||| ||||| || ||||| ||||||||||||||| | || || || |||| | || Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 182941 CACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAAC 183000 | || | ||||| ||||||| |||||||| || || | ||| ||||||| | Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGG---TC 434 Query 183001 AGGCAAACACA---TTTAAAGCGTTCGATTCCACTCAGGAGGAGGAGACCTATTCGATGG 183057 | || ||||| || | | | ||| | | || || |||||||| || || ||| Sbjct 433 AAGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGC 374 Query 183058 TTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGT 183117 | ||||| ||| | || ||||| ||| | |||| || || ||| ||||||| | ||| Sbjct 373 TAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGC 314 Query 183118 TGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCA 183177 | |||||||| | | || || || || || | ||| ||||||||| || || | Sbjct 313 TTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAA 254 Query 183178 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAG 183237 | || || || | || ||| | || ||||| ||| | ||| ||| | | || |||| Sbjct 253 TAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAG 195 Query 183238 AAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTG 183297 | || || ||||| ||||| ||||| || |||||||| || || |||||||| | ||| Sbjct 194 AGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTT 135 Query 183298 CTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTAC 183357 ||| ||||| || ||||| ||||| |||||| |||||||| ||||| || | Sbjct 134 TATGGATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTC 75 Query 183358 CTAGAGGTAACGCACT 183373 | ||||| ||| |||| Sbjct 74 CAAGAGGCAACTCACT 59 >seq9616 Length=845 Score = 262 bits (290), Expect = 5e-65 Identities = 384/543 (71%), Gaps = 0/543 (0%) Strand=Plus/Plus Query 181422 GGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATG 181481 || ||||| |||| ||| | |||||||| || || ||| || ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 181482 CTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCA 181541 | || ||||||||||| |||| |||| | |||||||| |||||||| || || || ||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 181542 GGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTC 181601 | ||| || || || || || |||||||| ||||| || || ||||| || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 181602 GTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAA 181661 | ||||| || | || | |||| || | || || | |||||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 181662 GAGACATACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCT 181721 |||||||| | ||| || || || || ||||||||| | | || ||||| || | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 181722 TCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATC 181781 || ||||||||| | | ||||||||||| ||||||||||| ||| | || || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 181782 TGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAAC 181841 ||||||||| | || || ||| || ||||| |||||| | ||||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 181842 CAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGT 181901 | || | | ||| | |||| | | | | ||||| ||||| ||| | || || | Sbjct 428 GAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGA 487 Query 181902 GCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTT 181961 || | || || |||||||| ||||| ||| | || || ||||||||||| || ||||| Sbjct 488 GCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTA 547 Query 181962 GCA 181964 ||| Sbjct 548 GCA 550 >seq15666 Length=534 Score = 208 bits (230), Expect = 9e-49 Identities = 366/531 (69%), Gaps = 3/531 (1%) Strand=Plus/Plus Query 181422 GGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTAC-AT 181480 || ||||| |||| ||| | |||||||| || || ||| || ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 181481 GCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGC 181540 | | || ||||||||||| ||||||||| | ||||| || |||||||| || || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 181541 AGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACT 181600 || ||| ||||| || || || |||||||| ||||| || || ||||| || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 181601 CGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGA 181660 | ||||| || | || | |||| || | || || | | | ||| || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 181661 AGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGC 181720 |||||||| | ||| || || || || ||||||||| | || ||||| || | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 181721 TTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAAT 181780 | || ||||||||| | || ||||||||||| ||||||||||| ||| | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 181781 CTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAA 181840 ||||||||| | || || | | || ||||| |||||| | |||| | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 181841 CCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCG 181900 | || | | ||| | ||| | | | | ||||| ||||| ||| | || || | Sbjct 422 TGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAG 481 Query 181901 TGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCC 181951 || | || || |||||||| ||||| ||| | || || ||| ||||||| Sbjct 482 AGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 187 bits (206), Expect = 3e-42 Identities = 291/415 (70%), Gaps = 1/415 (0%) Strand=Plus/Minus Query 181550 TGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGA 181609 ||| || || || |||||||| ||||| || || ||||| || || || | | || || Sbjct 709 TGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GA 651 Query 181610 GACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATA 181669 ||| || | || | |||| || | || || | |||||||| || || |||||||| Sbjct 650 GACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATA 591 Query 181670 CAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAA 181729 | ||| || || || || ||||||||| | | || |||||||| | | || || Sbjct 590 TAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAA 531 Query 181730 CAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCAC 181789 ||||||| | || ||||||||||| ||||||||||| ||| | || || |||||||| Sbjct 530 CAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCAC 471 Query 181790 CGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCTAT 181849 | | || || ||| || ||| | |||||| | ||||| | |||||||| | || | Sbjct 470 CTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACT 411 Query 181850 CCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGTCT 181909 | ||| | |||| | | | | ||||| ||||| ||| | || || | || | || Sbjct 410 TGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCT 351 Query 181910 CGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCA 181964 || |||||||| ||||| ||| | || || ||| ||||||| || ||||| ||| Sbjct 350 AGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGCA 296 >seq749 Length=5523 Score = 100 bits (110), Expect = 3e-16 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 161434 CACCTCCCTACATGCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTC 161493 ||||||| || ||||| |||||||| |||||||||||||| |||||| |||||||| Sbjct 4362 CACCTCC--ACGCGCGGGCGTAGCTCAATGGTAGAGCGTCAGCCTTCCAAGCTGAATGTT 4305 Query 161494 GTCGGTTCAAGTCCGATCTCCCGCTTT 161520 |||||||| ||||||||| |||||||| Sbjct 4304 GTCGGTTCGAGTCCGATCGCCCGCTTT 4278 >seq547 Length=6945 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 161447 GCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAGTC 161506 |||||||||||||||||||||||||||| || |||| |||||||||||||||| | || Sbjct 5287 GCGGGTGTAGCTCAGTGGTAGAGCGTCACGTTGCCAACGTGAATGTCGTCGGTTCGAATC 5228 Query 161507 CGATCTCCCGCTTT 161520 ||||| |||||||| Sbjct 5227 CGATCACCCGCTTT 5214 >seq1391 Length=3406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 161446 TGCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAGT 161505 ||||||||||| ||||||||||| |||||| || |||| |||||||||| |||||| ||| Sbjct 2411 TGCGGGTGTAGTTCAGTGGTAGAACGTCAGCTTCCCAAGCTGAATGTCGCCGGTTCGAGT 2352 Query 161506 CCGATCTCCCGCTTT 161520 ||| || |||||||| Sbjct 2351 CCGGTCACCCGCTTT 2337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614490243550560