Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq9616 309 4e-79 seq8042 262 6e-65 seq15666 244 2e-59 seq10300 226 4e-54 >seq9616 Length=845 Score = 309 bits (342), Expect = 4e-79 Identities = 380/519 (73%), Gaps = 0/519 (0%) Strand=Plus/Plus Query 174933 ATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAAC 174992 ||||| | ||||| |||||| ||||||| ||||| || |||||||||||||| | | Sbjct 32 ATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACAGC 91 Query 174993 ATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTC 175052 || || ||||| || |||||||| || ||||| |||| ||| ||||| || || | ||| Sbjct 92 ATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATCTCTATTC 151 Query 175053 TCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAG 175112 || |||||||| ||| | || || || || || | |||||| || | || | Sbjct 152 AGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGGATCTAAC 211 Query 175113 TCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCC 175172 |||| || | || || | ||||| || | || ||||| |||| ||| ||||| Sbjct 212 TCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATCAGCAGCA 271 Query 175173 CATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTC 175232 ||||| ||||| ||| | | || ||||| ||| | || ||||||||| | | Sbjct 272 CATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCAAGAAGCATA 331 Query 175233 CACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCC 175292 ||||||||| |||| ||||||||||| | ||||| ||||||||| | || || || || Sbjct 332 CACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCT 391 Query 175293 ACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGT 175352 |||||||| || ||| | |||||| | ||||||||| | || || | ||| | ||||| Sbjct 392 ACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGACTCAGAAGGT 451 Query 175353 AGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATG 175412 || | ||||| ||||| || | ||||| ||||| | || || |||||||||||| Sbjct 452 CATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATG 511 Query 175413 CATGAGAGAAATGCACACAACTTCCCACTAGATTTGGCA 175451 |||||||| |||||||||||||||||||||||| | ||| Sbjct 512 CATGAGAGGAATGCACACAACTTCCCACTAGATCTAGCA 550 >seq8042 Length=962 Score = 262 bits (290), Expect = 6e-65 Identities = 609/909 (67%), Gaps = 13/909 (1%) Strand=Plus/Minus Query 175959 GGCACAACTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGT 176018 |||||||| |||||||| |||||| || |||||| | || || || | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 176019 GCTAACTTTCTCACAGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTT 176078 ||||||| | ||||| || || || || ||| || ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 176079 CTACTTTGGGGTCCTGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTT 176138 ||| | ||||| || ||| | || || | || | || || | | | ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAA--CACTTATGGGCTCTT 785 Query 176139 T--GGTCCTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTC-GTCAG 176195 | || |||| || || | ||| ||| || | || || || || || | ||| Sbjct 784 TATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGGCAG 726 Query 176196 TTTGAACTGGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCT 176255 ||||| | || || | | |||| ||||| ||||| ||| | || |||| || ||| Sbjct 725 TTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCCCT 666 Query 176256 ATCG--CTGTATTTGTCAGTGTGTTTCTTC-TATACCCACTAGGTCAATCTTCCTGGTTC 176312 || || || | ||||||| || || | ||||| |||||||||| || |||||| Sbjct 665 ATAATACTATACATATCAGTGT---TCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTC 609 Query 176313 TTTGCCCCCTCCTTTGGTGTGGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTC 176372 ||||| || || ||| || ||||| ||||| || ||||| | || || || || || Sbjct 608 TTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTT 549 Query 176373 CACAACTGGACACTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCA 176432 ||||| ||||| || ||||| ||||||||||||||| | || || || | || | ||| Sbjct 548 CACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCT 489 Query 176433 CTACTATCTGCAATCCATGGCGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAG 176492 || |||| || || ||||| | || || | || || ||||| ||||||| || Sbjct 488 CTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGTCAAGCT 429 Query 176493 AACAACACCTTCACTGCGTTCGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACT 176552 ||| ||||||| | ||| | | ||||| || ||||| || || ||| | || Sbjct 428 TACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACA 369 Query 176553 GCGAACCGCTTCTGGTCGCAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCAC 176612 || || | |||||||| ||| | |||| || || ||| |||||| | ||||||||| Sbjct 368 GCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCAC 309 Query 176613 TTCTTTATGTTGTTTGTCCCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGG 176672 ||||| | | || || || || || | ||| ||| ||| || || || || Sbjct 308 TTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGA 249 Query 176673 CTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGAT 176732 || || | || ||| | || ||||| ||| | || ||| | | || ||||| || Sbjct 248 CTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAGGAC 190 Query 176733 CCTGAGTTTGAAACTTTCTACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGG 176792 || |||||||| || ||||| || |||||||| || ||||| ||||| | | |||| Sbjct 189 CCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTATGG 130 Query 176793 ATGGCACCTGTGGATCAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGA 176852 |||||| || ||||| |||||| || |||||| || ||||| || || ||| Sbjct 129 ATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAGA 70 Query 176853 GGTAACGCA 176861 || ||| || Sbjct 69 GGCAACTCA 61 >seq15666 Length=534 Score = 244 bits (270), Expect = 2e-59 Identities = 361/509 (71%), Gaps = 3/509 (1%) Strand=Plus/Plus Query 174933 ATGCCCTTGGGTATCTCTGGAACATTCAACTAC-ATGTTGGTCTTCCAAGCAGAACATAA 174991 ||||| | ||||| |||||| ||||||| ||||| || |||||||||||||| || Sbjct 28 ATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAGAACACAA 87 Query 174992 CATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTT 175051 ||| || |||||||| |||||||| || ||||| |||| ||| || || || || | || Sbjct 88 CATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGATCTCTATT 147 Query 175052 CTCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGA 175111 | || |||||||| ||| | || || || || || | |||||| || | || | Sbjct 148 CAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACACTTGGATCTAA 207 Query 175112 GTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGC 175171 |||| || | || || | | | || || || ||||| |||| ||| ||||| Sbjct 208 CTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATATCAGCAGC 267 Query 175172 CCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACT 175231 ||||| ||||| ||| | || ||||| |||| | || ||||||||| | || Sbjct 268 ACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCAAGAAGCCT 327 Query 175232 CCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTC 175291 ||||||||| |||| ||||||||||| | ||||| ||||||||| | || || | || Sbjct 328 ACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGCATC 387 Query 175292 CACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGG 175351 || ||||| || ||| | |||| | | |||| | || || | ||| | ||| Sbjct 388 TACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGACTCAGAAGA 445 Query 175352 TAGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAAT 175411 | || | ||||| ||||| || | ||||| ||||| | || || ||||||||||| Sbjct 446 TCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAAT 505 Query 175412 GCATGAGAGAAATGCACACAACTTCCCAC 175440 ||||||||| ||||||||| ||||||||| Sbjct 506 GCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 226 bits (250), Expect = 4e-54 Identities = 291/398 (73%), Gaps = 5/398 (1%) Strand=Plus/Minus Query 175056 GCGATGCATGGTTCACTTGTTACCTCTTC--ACTTGTCCGTGAGACAACTGAAACTGAGT 175113 || |||||||| ||| | || || || || ||||| || |||||| || | || | | Sbjct 690 GCTATGCATGGATCATTGGTAACTTCATCCTACTTG--CG-GAGACACTTGGATCTAACT 634 Query 175114 CACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCC 175173 ||| || | || || | ||||| || || || ||||| |||| ||| ||||| | Sbjct 633 CACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCAC 574 Query 175174 ATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCC 175233 |||| ||||| ||| | | || |||||||||| | || ||||||||| | || | Sbjct 573 ATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAACAACTCAAGAAGTCTAC 514 Query 175234 ACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCA 175293 |||||||| |||| ||||||||||| | ||||| ||||||||| | || || || || | Sbjct 513 ACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTA 454 Query 175294 CAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTA 175353 ||||| | || ||| | ||||| | |||||||| | || || | ||| | ||||| Sbjct 453 CAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTTGTAGACTCAGAAGGTC 394 Query 175354 GAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGC 175413 || | ||||| ||||| || | ||||| ||||| | || || ||||||||||||| Sbjct 393 ATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGC 334 Query 175414 ATGAGAGAAATGCACACAACTTCCCACTAGATTTGGCA 175451 ||||||| ||||||||| |||||||||||||| | ||| Sbjct 333 ATGAGAGGAATGCACACGACTTCCCACTAGATCTAGCA 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729778349462760