Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq8042 282 5e-71 seq9616 279 6e-70 seq15666 223 4e-53 seq10300 194 2e-44 seq749 100 3e-16 seq547 98.7 1e-15 seq1391 95.1 1e-14 seq2124 89.7 6e-13 seq9663 86.0 8e-12 >seq8042 Length=962 Score = 282 bits (312), Expect = 5e-71 Identities = 617/910 (68%), Gaps = 23/910 (3%) Strand=Plus/Minus Query 179331 GGGACAGCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGT 179390 || ||| | ||||| || |||||| || || ||| | || || || || | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 179391 GCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 179450 ||||||| | || ||||| || || || ||| || ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 179451 CTACTTTGGGGTCCTGAGTCTCAGGGGAATTTC-CAGCGGTGGTGCCAACTTGGGGGACT 179509 ||| | ||||| || || | || || |||| || | || |||| ||| || Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAA----GATGAACACTTATGGG-CT 788 Query 179510 CT----GGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTA-GG 179564 || ||| ||| | || | ||| ||| || | || || || || ||| || Sbjct 787 CTTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGG 729 Query 179565 CAATTTGAACTTGCTCGCCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGT 179624 || ||||| | || || | | |||| | || |||||||| | || || | || Sbjct 728 CAGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 179625 CCTAT--TGCTGTATTCGTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGT 179682 ||||| | || || |||||||| | |||| || ||||| || || |||||||||| Sbjct 668 CCTATAATACTATACATATCAGTGTT--CGTCATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 179683 TTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTT 179742 | || || || || ||| || || || |||||||||||| | || ||||| || || | Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 179743 TCCACAACTGGACGCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAG 179802 | ||||| ||||| || ||||| ||||||||||||||| | || || || | |||| || Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 179803 CACTGCTCAGTGCTATCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAA- 179861 | || | ||||| ||||| | || |||| || || | ||| ||||||| || Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGTCAAG 431 Query 179862 CAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTC 179921 | || | ||||| | | || | | || || || |||||||| |||||| | Sbjct 430 CTTACACA-ACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTA 372 Query 179922 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTT 179981 || || || | |||||||| || | |||| | |||||||| || ||| | |||||| Sbjct 371 ACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTT 312 Query 179982 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 180041 || || ||| | | || || || || || | ||||| || ||||| || || || Sbjct 311 CACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATA 252 Query 180042 GGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAA 180101 || || || |||||||| | || || || || || ||||||| || || ||||| Sbjct 251 GGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAGTAAAG-GCTGCAGAG 193 Query 180102 GATCCCGAGTTTGAGACCTTCTACACCAAGAACATTCTTCTCAATGAAGGACTACGTGCA 180161 || || ||||||||||| ||||| || |||||||| || || |||||||| | ||| | Sbjct 192 GACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTA 133 Query 180162 TGGTTGGCA--CCAGTTGATCAACCACATGAGTCATTCGTATTCCCAGAAGAAGTTCTGC 180219 ||| ||||| ||| || ||||| |||||| ||| |||||| || ||||| || | Sbjct 132 TGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTC 75 Query 180220 CAAGAGGTAA 180229 ||||||| || Sbjct 74 CAAGAGGCAA 65 >seq9616 Length=845 Score = 279 bits (308), Expect = 6e-70 Identities = 373/519 (72%), Gaps = 0/519 (0%) Strand=Plus/Plus Query 178314 ATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAAC 178373 |||||||| || || ||| || ||||||| ||| | || |||||||||||||||| | Sbjct 32 ATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACAGC 91 Query 178374 ATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTC 178433 ||| | ||||| || |||||||| || || || |||| ||| ||||| || || || ||| Sbjct 92 ATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATCTCTATTC 151 Query 178434 AGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAA 178493 ||||| ||||| || || ||||| || || || || || || || || | | | Sbjct 152 AGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGGATCTAAC 211 Query 178494 TCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCA 178553 |||| || | || |||| |||||||| | || |||||||| | ||| |||||| Sbjct 212 TCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATCAGCAGCA 271 Query 178554 CATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTG 178613 ||||| ||||| ||| | | || ||||| || | || ||||||||| | | Sbjct 272 CATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCAAGAAGCATA 331 Query 178614 CACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGC 178673 ||||||||||| ||||||||||| ||| | || || ||||||||| | || || ||| Sbjct 332 CACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCT 391 Query 178674 ACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGA 178733 || ||||| |||||| | ||||| | ||||||||| | || | | ||| | |||| Sbjct 392 ACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGACTCAGAAGGT 451 Query 178734 CGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATG 178793 | | | | ||||||||||| ||| | || || | || | || || |||||||| ||| Sbjct 452 CATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATG 511 Query 178794 CACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCA 178832 || ||| | || || ||||||||||| || ||||| ||| Sbjct 512 CATGAGAGGAATGCACACAACTTCCCACTAGATCTAGCA 550 >seq15666 Length=534 Score = 223 bits (246), Expect = 4e-53 Identities = 355/507 (70%), Gaps = 3/507 (1%) Strand=Plus/Plus Query 178314 ATGCCACTTGGCATCTCTGGTACATTCAACTAC-ATGCTTGTTTTCCAAGCAGAACACAA 178372 |||||||| || || ||| || ||||||| ||| | || ||||||||||||||||| Sbjct 28 ATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAGAACACAA 87 Query 178373 CATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTT 178432 |||| | |||||||| |||||||| || || || |||| ||| || || || || || || Sbjct 88 CATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGATCTCTATT 147 Query 178433 CAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGA 178492 |||||| ||||| || || ||||| || || || || || || || || | | | Sbjct 148 CAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACACTTGGATCTAA 207 Query 178493 ATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGC 178552 |||| || | || |||| | | ||| || || |||||||| | ||| ||||| Sbjct 208 CTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATATCAGCAGC 267 Query 178553 ACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACT 178612 |||||| ||||| ||| | || ||||| || | | || ||||||||| | || Sbjct 268 ACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCAAGAAGCCT 327 Query 178613 GCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAG 178672 ||||||||||| ||||||||||| ||| | || || ||||||||| | || || | | Sbjct 328 ACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGCATC 387 Query 178673 CACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGG 178732 || ||||| |||||| | |||| | | |||| | || | | ||| | ||| Sbjct 388 TACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGACTCAGAAGA 445 Query 178733 ACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCAT 178792 | | | | ||||||||||| ||| | || || | || | || || |||||||| || Sbjct 446 TCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAAT 505 Query 178793 GCACGAGCGCAACGCGCACAACTTCCC 178819 ||| ||| | || || ||| ||||||| Sbjct 506 GCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 194 bits (214), Expect = 2e-44 Identities = 292/414 (71%), Gaps = 1/414 (0%) Strand=Plus/Minus Query 178419 GGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAA 178478 || || || || |||||||| ||||| || || ||||| || || || | | || || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 178479 ACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATAC 178538 || || | | | |||| || | || |||| |||||||| || || |||||||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 178539 AACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAAC 178598 | ||| ||||||||||| ||||| ||| | | || |||||||| | | || ||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 178599 AACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACC 178658 |||||| | || ||||||||||| ||||||||||| ||| | || || ||||||||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 178659 GCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATC 178718 | || || ||| || ||| | |||||| | ||||| | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 178719 CTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTC 178778 | ||| | |||| | | | | ||||||||||| ||| | || || | || | || Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 178779 GGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCA 178832 || |||||||| ||||| ||| | || || ||| ||||||| || ||||| ||| Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGCA 296 >seq749 Length=5523 Score = 100 bits (110), Expect = 3e-16 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 156937 CACCTCCCTACATGCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTC 156996 ||||||| || ||||| |||||||| |||||||||||||| |||||| |||||||| Sbjct 4362 CACCTCC--ACGCGCGGGCGTAGCTCAATGGTAGAGCGTCAGCCTTCCAAGCTGAATGTT 4305 Query 156997 GTCGGTTCAAGTCCGATCTCCCGCTTT 157023 |||||||| ||||||||| |||||||| Sbjct 4304 GTCGGTTCGAGTCCGATCGCCCGCTTT 4278 >seq547 Length=6945 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 156950 GCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAGTC 157009 |||||||||||||||||||||||||||| || |||| |||||||||||||||| | || Sbjct 5287 GCGGGTGTAGCTCAGTGGTAGAGCGTCACGTTGCCAACGTGAATGTCGTCGGTTCGAATC 5228 Query 157010 CGATCTCCCGCTTT 157023 ||||| |||||||| Sbjct 5227 CGATCACCCGCTTT 5214 >seq1391 Length=3406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 156949 TGCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAGT 157008 ||||||||||| ||||||||||| |||||| || |||| |||||||||| |||||| ||| Sbjct 2411 TGCGGGTGTAGTTCAGTGGTAGAACGTCAGCTTCCCAAGCTGAATGTCGCCGGTTCGAGT 2352 Query 157009 CCGATCTCCCGCTTT 157023 ||| || |||||||| Sbjct 2351 CCGGTCACCCGCTTT 2337 >seq2124 Length=2445 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 18757 GGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAAGTC 18816 || |||||||||||||||||||||||| ||||||||||| ||| |||| |||||| |||| Sbjct 1630 GGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTC 1571 Query 18817 CCATCAATCCCG 18828 || ||| || || Sbjct 1570 CCGTCACTCGCG 1559 >seq9663 Length=843 Score = 86.0 bits (94), Expect = 8e-12 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 178252 TAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTC--TGA 178309 ||| ||||||||| ||||||||| | || || ||| | || ||||| | |||| ||| Sbjct 203 TAGTAGCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGA--AGTTTCAGTGA 260 Query 178310 CGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACA 178369 | |||||||| || || ||| || || |||| | | | || | |||||| ||||| Sbjct 261 TGGTATGCCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACA 320 Query 178370 CAACATTCTGATGCACCCCTTCCAC 178394 |||||| || ||||||| |||||| Sbjct 321 CAACATGCTCGTGCACCCATTCCAC 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605884027235760