Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq8042 277 2e-69 seq9616 253 2e-62 seq15666 194 2e-44 seq10300 170 2e-37 seq9663 95.1 1e-14 seq15657 82.4 8e-11 >seq8042 Length=962 Score = 277 bits (306), Expect = 2e-69 Identities = 620/923 (67%), Gaps = 25/923 (3%) Strand=Plus/Minus Query 160007 GGAACAACTTTCGCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGGT 160066 || ||||| || | || || ||| || ||||| | || || || || | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 160067 GCAAACTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTT 160126 |||||| | ||||| |||||||||| |||||| | ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 160127 CTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTC 160186 || | ||||| || || || ||||| |||| || || | |||| ||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAAC---ACTTATGGG-CTC 787 Query 160187 T----GGA-----ATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTC 160237 | ||| ||| | ||||| || ||| || | || || || | Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAAT-----CTTTGCAGTTATAGGCTTTTGTTTA 732 Query 160238 CGTCAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCT 160297 | |||||||| | || | | || |||| ||||| ||||||||| | || ||| | Sbjct 731 AGGCAGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACA 672 Query 160298 GGTCCTAT--TGCTGTCTTTGTCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTT 160355 || ||||| | || | | |||| || || |||| ||||| || ||||| ||| || Sbjct 671 GGCCCTATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCTT 614 Query 160356 GGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAG 160415 |||| || || || || ||| || ||||| ||||| || ||||| | ||||| |||| Sbjct 613 GGTTCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAG 554 Query 160416 GATTTCACAACTGGACGCTTAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAG 160475 | |||||||| ||||| || ||||| ||||||||||||||| | || || || | |||| Sbjct 553 GCTTTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAG 494 Query 160476 GAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAG 160535 ||| || | || || ||||| | || |||| ||||| | ||| ||||||| Sbjct 493 CAGCTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGTC 434 Query 160536 AA-CAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATG 160594 || | || | ||||| | | || | | || || || |||||||| |||||| Sbjct 433 AAGCTTACACA-ACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATG 375 Query 160595 GTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGG 160654 | || || || | |||||||| || | |||| | || ||||| || ||| | ||| Sbjct 374 CTAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGG 315 Query 160655 CTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATT 160714 ||||| || ||| | | || || || || || | ||||| || ||| || || Sbjct 314 CTTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATA 255 Query 160715 ATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCA 160774 || || || || |||| ||| | || || || || | ||| ||| || || ||| Sbjct 254 ATAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAGTAAAG-GCTGCA 196 Query 160775 GAAGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCTACTGAATGAAGGACTACGT 160834 || || ||||| |||||||| ||||| || |||||||| ||||| |||||||| | ||| Sbjct 195 GAGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGT 136 Query 160835 GCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTT 160894 |||| | ||| || ||||| ||||||||||| ||||| || ||||| ||| Sbjct 135 TTATGGATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTT 76 Query 160895 CCTAGAGGCAACGCCCTTTAATA 160917 || ||||||||| | || || || Sbjct 75 CCAAGAGGCAACTCACTATAGTA 53 >seq9616 Length=845 Score = 253 bits (280), Expect = 2e-62 Identities = 386/546 (71%), Gaps = 8/546 (1%) Strand=Plus/Plus Query 158820 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATG 158879 || ||||| |||| |||| |||||| || ||||| ||| || || |||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 158880 CTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCT 158939 | ||||||||||||||||||| ||| | ||||| || ||||| || | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 158940 GGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTC 158999 | || ||||| |||||||| ||| ||||||||||||| | || ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 159000 GTTCGTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAA 159059 || || || || | | | |||| || | || || | |||||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 159060 GAAACATATA--ATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACG 159117 || ||||||| ||||| ||||| ||||| ||||| ||| | | || ||||| ||| Sbjct 248 GAGACATATAGCATATC--AGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACA 305 Query 159118 CTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCA 159177 | || |||||||| | | | ||||||||||| || |||||||| || | || | Sbjct 306 GTAGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTA 365 Query 159178 TCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCA 159237 | ||||||||| | || || || || || ||||| || ||| | || ||| | ||||||| Sbjct 366 TATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCA 425 Query 159238 ACCAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTACTGAA 159295 || | || | | || |||| |||| | | | ||||| ||||| || |||| || Sbjct 426 ACGAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAA 483 Query 159296 CCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGA 159355 | |||| || ||||||||||| ||||||||| | || ||||||||||||||||| || Sbjct 484 TAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGA 543 Query 159356 CCTTGC 159361 || || Sbjct 544 TCTAGC 549 >seq15666 Length=534 Score = 194 bits (214), Expect = 2e-44 Identities = 369/537 (69%), Gaps = 11/537 (2%) Strand=Plus/Plus Query 158820 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTAC-AT 158878 || ||||| |||| |||| |||||| || ||||| ||| || || |||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 158879 GCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGC 158938 | | ||||||||||||||||||||||| | |||||||| ||||| || | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 158939 TGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACT 158998 | || || || |||||||| ||| ||||||||||||| | || ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 158999 CGTTCGTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGA 159058 || || || || | | | |||| || | || || | | | ||| || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 159059 AGAAACATATA--ATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATAC 159116 || ||||||| ||||| ||||| ||||| ||||| ||| | || ||||| ||| Sbjct 244 TGAGACATATAGCATATC--AGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTAC 301 Query 159117 GCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGC 159176 | | || |||||||| | | | ||||||||||| || |||||||| || | || Sbjct 302 GGTAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGT 361 Query 159177 ATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTC 159236 || ||||||||| | || || | || || ||||| || ||| | || | | | || Sbjct 362 ATATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTC 419 Query 159237 AACCAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTACTGA 159294 || | || | | || |||| | || | | | ||||| ||||| || |||| | Sbjct 420 AATGAATCACTTGTAGA--CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTA 477 Query 159295 ACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 159351 | | |||| || ||||||||||| ||||||||| | || |||||| ||||||||| Sbjct 478 ATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 170 bits (188), Expect = 2e-37 Identities = 291/417 (70%), Gaps = 9/417 (2%) Strand=Plus/Minus Query 158949 GGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAA 159008 || |||||||| ||| ||||||||||||| | || ||||| || | | || || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 159009 ACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATAT 159068 || || | | | |||| || | || || | |||||||| || || || |||||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 159069 A--ATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCA 159126 | ||||| ||||| ||||| ||||| ||| | | || |||||||||| | || | Sbjct 589 AGCATATCA--GCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTA 532 Query 159127 ACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCA 159186 ||||||| | | ||||||||||| || |||||||| || | || || ||||||| Sbjct 531 ACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCA 472 Query 159187 CCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCA 159246 || | || || || || || ||| | || ||| | || || | |||||||| | || Sbjct 471 CCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCAC 412 Query 159247 TCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGG 159304 | | || |||| |||| | | | ||||| ||||| || |||| || | |||| Sbjct 411 TTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGA 354 Query 159305 TCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGC 159361 || ||||||||||| ||||||||| | || |||||| |||||||||| || || || Sbjct 353 CCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq9663 Length=843 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 158787 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATG 158846 |||||||| || |||||| | || || ||| | || ||||| |||| |||| |||| Sbjct 208 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 267 Query 158847 CCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATC 158906 || || ||||| ||| || ||||||| | | | |||| |||||| ||||||||||| Sbjct 268 CCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATG 327 Query 158907 CTTATGCACCCGTTCCA 158923 || ||||||| ||||| Sbjct 328 CTCGTGCACCCATTCCA 344 >seq15657 Length=537 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 158787 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATG 158846 |||||||| || |||||| | || || ||| | || ||||| |||| |||| |||| Sbjct 23 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 82 Query 158847 CCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACA 158901 || || ||||| ||| || || |||| ||| | ||||||||||||||||||| Sbjct 83 CCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552359120564160