Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq8042 307 1e-78 seq9616 266 4e-66 seq15666 206 3e-48 seq10300 187 3e-42 seq749 100 3e-16 seq547 98.7 1e-15 seq1391 95.1 1e-14 seq9663 91.5 2e-13 seq2124 89.7 6e-13 >seq8042 Length=962 Score = 307 bits (340), Expect = 1e-78 Identities = 623/914 (68%), Gaps = 23/914 (3%) Strand=Plus/Minus Query 180129 GGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGT 180188 |||||| | |||||||| |||||| || || ||| | || || || | ||||| Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 180189 GCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTT 180248 ||||||| | || ||||| || || || ||| | ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 180249 CTACTTTGGGGTCCTGAGTCTCAGGGGAATTTC-CAACGGTGGTGCCAACTTGGGGGACT 180307 ||| | ||||| || || | || || |||| ||| | || |||| ||| || Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAA----GATGAACACTTATGGG-CT 788 Query 180308 CT----GGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCC 180363 || ||| ||| | || | ||| ||| || | || || ||| || | | Sbjct 787 CTTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTTTGTTTAAGGC 728 Query 180364 AGTTTGAACTGGCACGTCTTATTG-GTATCCGTCCTTACAATGCTATTGCATTCTCTGGT 180422 ||||||| | || | |||| | |||| ||||| ||||||||| | || ||| | || Sbjct 727 AGTTTGAGATAGCCAG-CTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 180423 CCTATCG--CTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGT 180480 ||||| || || | |||| || | |||| ||||| | ||||| ||| ||||| Sbjct 668 CCTATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 180481 TCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTT 180540 ||||||| || | ||| || ||||| ||||| || ||||| || || || || || | Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 180541 TCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAG 180600 | ||||| ||||| || ||||| ||||||||||||||| | || || || | || | || Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 180601 CATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAAC 180660 | | ||||||| || ||||| | || || | ||||| | ||| ||||||| | Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGG---TC 434 Query 180661 AAGCAAAC---ACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGG 180717 |||| || ||||| | |||| | |||||||| ||||| |||||||||||| Sbjct 433 AAGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGC 374 Query 180718 TCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGC 180777 | || || || | |||||||| || | |||| | |||||||| || ||| | |||| Sbjct 373 TAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGC 314 Query 180778 TTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTA 180837 |||| || ||| | | || || || || || | ||||| || ||||| || || | Sbjct 313 TTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAA 254 Query 180838 TTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAG 180897 | || || || |||||||| | || || || || | ||| ||| | | || |||| Sbjct 253 TAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAG 195 Query 180898 AAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTG 180957 | || || ||||| ||||| ||||| || |||||||| ||| | |||||||| | ||| Sbjct 194 AGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTT 135 Query 180958 CATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTAC 181017 |||| ||||| || ||||| || || |||||| |||||||| ||||| || | Sbjct 134 TATGGATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTC 75 Query 181018 CAAGAGGTAACGCA 181031 ||||||| ||| || Sbjct 74 CAAGAGGCAACTCA 61 >seq9616 Length=845 Score = 266 bits (294), Expect = 4e-66 Identities = 384/542 (71%), Gaps = 0/542 (0%) Strand=Plus/Plus Query 179302 GGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATG 179361 || ||||| |||| ||||| |||||| || ||||| ||| || || |||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 179362 CTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCT 179421 | ||||||||||||||||||| ||| | ||||| || ||||| || | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 179422 GGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTT 179481 | || ||||| |||||||| ||| ||||||||| ||| | || ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 179482 GTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAA 179541 || || ||| || | | |||| || | || |||| |||||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 179542 GAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCA 179601 ||||| |||| ||| ||||||||||| ||||| ||| | | || ||||| || Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 179602 TCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATC 179661 ||||||||||||| | | ||||||||||| || || ||||| || | || || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 179662 TGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTCAAC 179721 |||||||| |||| || || || || ||||| || ||| | || ||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 179722 CAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAACCGT 179781 | || | | ||| |||| | | | ||||||||||||| ||| || | || | Sbjct 428 GAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGA 487 Query 179782 GCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTT 179841 |||| | ||||||||||| ||||||||| | || ||||||||||||||||| || || Sbjct 488 GCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTA 547 Query 179842 GC 179843 || Sbjct 548 GC 549 >seq15666 Length=534 Score = 206 bits (228), Expect = 3e-48 Identities = 367/533 (69%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 179302 GGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTAC-AT 179360 || ||||| |||| ||||| |||||| || ||||| ||| || || |||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 179361 GCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGC 179420 | | ||||||||||||||||||||||| | |||||||| ||||| || | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 179421 TGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCT 179480 | || || || |||||||| ||| ||||||||| ||| | || ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 179481 TGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGA 179540 || || ||| || | | |||| || | || |||| | | ||| || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 179541 AGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGC 179600 ||||| |||| ||| ||||||||||| ||||| ||| | || ||||| || | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 179601 ATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCAT 179660 ||||||||||||| | | ||||||||||| || || ||||| || | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 179661 CTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTCAA 179720 |||||||| |||| || | || || ||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 179721 CCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAACCG 179780 | || | | ||| ||| | | | ||||||||||||| ||| || | || | Sbjct 422 TGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAG 481 Query 179781 TGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 179833 |||| | ||||||||||| ||||||||| | || |||||| ||||||||| Sbjct 482 AGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 187 bits (206), Expect = 3e-42 Identities = 290/413 (70%), Gaps = 1/413 (0%) Strand=Plus/Minus Query 179431 GGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTCGTGAA 179490 || |||||||| ||| ||||||||| ||| | || ||||| || || || || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAG 650 Query 179491 ACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTAT 179550 ||| || | | |||| || | || |||| |||||||| || || ||||| ||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 179551 AACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAAC 179610 | ||| ||||||||||| ||||| ||| | | || |||||||| | ||||||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 179611 AACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTCACT 179670 |||||| | | | ||||||||||| || || ||||| || | || || |||||||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 179671 GCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTCAACCAGTCCATC 179730 |||| || || || || ||| | || ||| | || || | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 179731 CTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAACCGTGCAGGTTTG 179790 | ||| |||| | | | ||||||||||||| ||| || | || | |||| | Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 179791 GGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGC 179843 ||||||||||| ||||||||| | || |||||| |||||||||| || || || Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq749 Length=5523 Score = 100 bits (110), Expect = 3e-16 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 155843 CACCTCCCTACATGCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTC 155902 ||||||| || ||||| |||||||| |||||||||||||| |||||| |||||||| Sbjct 4362 CACCTCC--ACGCGCGGGCGTAGCTCAATGGTAGAGCGTCAGCCTTCCAAGCTGAATGTT 4305 Query 155903 GTCGGTTCAAGTCCGATCTCCCGCTTT 155929 |||||||| ||||||||| |||||||| Sbjct 4304 GTCGGTTCGAGTCCGATCGCCCGCTTT 4278 >seq547 Length=6945 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 155856 GCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAGTC 155915 |||||||||||||||||||||||||||| || |||| |||||||||||||||| | || Sbjct 5287 GCGGGTGTAGCTCAGTGGTAGAGCGTCACGTTGCCAACGTGAATGTCGTCGGTTCGAATC 5228 Query 155916 CGATCTCCCGCTTT 155929 ||||| |||||||| Sbjct 5227 CGATCACCCGCTTT 5214 >seq1391 Length=3406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 155855 TGCGGGTGTAGCTCAGTGGTAGAGCGTCAGTTTTCCAAACTGAATGTCGTCGGTTCAAGT 155914 ||||||||||| ||||||||||| |||||| || |||| |||||||||| |||||| ||| Sbjct 2411 TGCGGGTGTAGTTCAGTGGTAGAACGTCAGCTTCCCAAGCTGAATGTCGCCGGTTCGAGT 2352 Query 155915 CCGATCTCCCGCTTT 155929 ||| || |||||||| Sbjct 2351 CCGGTCACCCGCTTT 2337 >seq9663 Length=843 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 179278 GCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGT 179337 ||||||||| | || || ||| | || ||||| |||| ||||| |||||| || ||| Sbjct 217 GCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGT 276 Query 179338 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCAC 179397 || ||| || ||||||| | | | |||| |||||| ||||||||||| || ||||| Sbjct 277 ATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATGCTCGTGCAC 336 Query 179398 CCGTTCCA 179405 || ||||| Sbjct 337 CCATTCCA 344 >seq2124 Length=2445 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 18910 GGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAAGTC 18969 || |||||||||||||||||||||||| ||||||||||| ||| |||| |||||| |||| Sbjct 1630 GGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTC 1571 Query 18970 CCATCAATCCCG 18981 || ||| || || Sbjct 1570 CCGTCACTCGCG 1559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610203132077760