Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq486 116 5e-21 seq44 107 2e-18 >seq486 Length=7659 Score = 116 bits (128), Expect = 5e-21 Identities = 187/260 (72%), Gaps = 8/260 (3%) Strand=Plus/Plus Query 176379 TCGCGTTCAAGCTGTTCCTTCACCTGATCGAAGTGATTGTTATAGATGTGGGTATCACC- 176437 ||||| || ||||| |||||||| |||| ||| ||| | |||||||| | ||| || Sbjct 2645 TCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGCCG 2704 Query 176438 AAGGT-TGC-CGATCAGTTCCCCGACTTCCAAGCCGCATTCCAGCGCGATCAGATGTGTC 176495 ||||| ||| ||| ||| |||| ||| |||| || || ||||||||| || ||| Sbjct 2705 AAGGTGTGCACGA--AGTCCCCC-ACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTC 2761 Query 176496 AGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCCCAAGAAGACGTCCACGGACCGCTGA 176555 |||| |||||| |||||||||||| || | || | ||| | |||| | || ||||| Sbjct 2762 AGGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGG 2821 Query 176556 TTCCAAAGGCAGGACAGTTTCCCGTTGCGGACATAGAACTGGAAACCGTA-GTGACACGG 176614 | ||||| ||| || ||| | ||| ||||||||| ||| | | ||| ||||| Sbjct 2822 TAGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGG-AACAGCAGGTGGCACGG 2880 Query 176615 CGGCAAAGCCATTAGATCGA 176634 ||||| ||||| | |||| Sbjct 2881 CGGCAGGGCCATCTGGTCGA 2900 >seq44 Length=32007 Score = 107 bits (118), Expect = 2e-18 Identities = 215/314 (68%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 176412 TGATTGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGACTTCCAAGCCG 176471 ||||| ||||| || | ||| |||| || ||| | || || ||||| | ||| Sbjct 27942 TGATTTGAATAGAGATGCGCATCCCCAAAAGTGTGGATGAACTCGCCCACTTCGA-GCCC 27884 Query 176472 CATT-CCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCC 176530 | | || |||| |||| || || || || || |||||||||||||| || | || Sbjct 27883 CGTCACCTGCGCCATCATCTGCAAGAGCAGCGCATAGGAGGCGATGTTGAACGGCACGCC 27824 Query 176531 CAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTCCCGTTGCGGACATA 176590 |||||| || || |||| ||||||| ||||||| || || |||| ||||| Sbjct 27823 CAAGAACACATCAGCGGAGCGCTGATAGAGCTGGCAGGAAAGCTTGCCGTCCGCCACATA 27764 Query 176591 GAACTGGAAACCGTAGTGACACGGCGGCAAAGCCATTAGATCGACCGCCCCGACATTCCA 176650 ||||||||| ||||||| ||||||| ||||| ||| || || | |||||||| Sbjct 27763 GAACTGGAACAGACAGTGACAGGGCGGCAGCGCCATATTATCTACGTCCGCCACATTCCA 27704 Query 176651 AGCCGAGACCATATGACGACGGCTGAGAGGATCATTCTTGA--TGGTCACGATGACGTCA 176708 ||||| || || | || ||| | |||| ||||| || |||||| || | || Sbjct 27703 GGCCGACACGATCAGCCGCCGGGAGTCTGGATTATTCTCGATCTGGTCA--ATCAGGTTT 27646 Query 176709 ATGATCTGATCGAT 176722 |||||||||| || Sbjct 27645 TTGATCTGATCAAT 27632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622786124184120