Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027299.1 Length=42092 Score E Sequences producing significant alignments: (Bits) Value seq253 107 5e-19 >seq253 Length=11450 Score = 107 bits (118), Expect = 5e-19 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 38902 GACACCGCAGGCGACGAAACATACCGCGTGACAGCGAATGAATTGCGCCAGTTCGTAGAA 38961 |||| |||| ||| | | |||||||| || || |||| ||||||||||| | ||| Sbjct 877 GACAGCGCAATCGAAGCCAACTACCGCGTCACCGCAGATGAGCTGCGCCAGTTCATCGAA 818 Query 38962 CGGATCGAACGGCTGGATGCCGAGAAGAAAGACCTCGCGGACCAGCGCAAGGACGTATTC 39021 ||||||||||| ||||| || || ||||||||| | || ||||| | || || || | Sbjct 817 CGGATCGAACGACTGGACGCGGAAAAGAAAGACATTGCCGACCAACAGAAAGAGGTCATG 758 Query 39022 GCGGAAGCCAAGGCGCGAGGCTACGAC 39048 || |||||||| || || ||||||||| Sbjct 757 GCCGAAGCCAAAGCACGCGGCTACGAC 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134546309091996