Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027334.1 Length=47800 Score E Sequences producing significant alignments: (Bits) Value seq3584 167 7e-37 seq6243 145 2e-30 seq9687 129 2e-25 seq11014 91.5 5e-14 >seq3584 Length=1674 Score = 167 bits (184), Expect = 7e-37 Identities = 325/470 (69%), Gaps = 14/470 (3%) Strand=Plus/Plus Query 46899 GAGGGCGAGGACGATGTTCCCGAGGCGCCGGTGGTGCCGATCTCGCAAGCTGGCGATCTG 46958 || |||||||| |||||||| ||| | |||| | | | || || || ||||| Sbjct 1044 GATGGCGAGGATGATGTTCCAGAGCCCCCGGCACCCCTG-TGTCAGTCGCAGGTGATCTT 1102 Query 46959 TGGCTCATGGGGCCGCACCGCTTGGTCTGCGGCGACTCCACGTCGGCGGCCTCGGT--GT 47016 |||| | ||| |||| || || ||||||| ||| ||| || | ||| | Sbjct 1103 TGGCAACTCGGGTCGCATCGGCTGATCTGCGGTGACAGCACCAGCGCCGATGTGGTTGGA 1162 Query 47017 CGCGGCTGTTGAACGGCGTTGTGCCGCTGTTGATGGTCACCGACCCGCCCTATGGCGTGA 47076 |||| | || | |||| ||||| ||||||| || ||||| ||||| |||||| Sbjct 1163 CGCG--TTCTGGGCAGCGTCAAACCGCTACTGATGGTGACTGACCCACCCTACGGCGTGG 1220 Query 47077 AGTACGATCCGAAGTGGCGCACCGAGGCCGGTTACGGCTCGGCCGGGCAGGCGAAC-GGT 47135 | |||||||| ||||||| |||| || || | || | || || || Sbjct 1221 AATACGATCCCTCTTGGCGCAATCAGGCTGGGGCCGCAAAGACC----AAACGCACAGGC 1276 Query 47136 GTGGTGCAGAACGACGACCGCGCCGACTGGCGTGAAGCCTGGGCGCTGTTCCCGGGCGAT 47195 ||| | ||||||||||||||| |||||||| || |||||| | || || || |||||| Sbjct 1277 AAGGTCCTGAACGACGACCGCGCTGACTGGCGCGAGGCCTGGTCCCTCTTTCCCGGCGAT 1336 Query 47196 GTCGCCTATGTCTGGCACGGCGCGCTGCATGCCGGCGTC-GTCGAGGCCAGTCTGAAAGC 47254 || |||||| ||||||| ||||| || |||| | ||| | || | | ||| |||| || Sbjct 1337 GTGGCCTATATCTGGCATGGCGCACTTCATG-CAGCGACTGTGGCCGACAGCCTGATCGC 1395 Query 47255 GGCCGGGTTCGAGACGCGCTCGCAGATCATCTGGGTGAAGCAGCGGCCGGTGTTCTCGCG 47314 || || |||| | ||||| ||||||||||||| ||| | |||| ||| || || Sbjct 1396 CGCGGGCTTCGCCATCCGCTCCCAGATCATCTGGGCAAAGGATCGGCTAGTGCTCAGCCG 1455 Query 47315 TGGTCACTACCACTGGCAGCACGAACCCGCGCT-CTATGCCGAGCGCACC 47363 || | ||||||||||||||||| ||| ||| ||||||| |||| || Sbjct 1456 CGGCGATTACCACTGGCAGCACGAGCCC-TGCTGGTATGCCGTGCGCGCC 1504 >seq6243 Length=1144 Score = 145 bits (160), Expect = 2e-30 Identities = 195/267 (73%), Gaps = 11/267 (4%) Strand=Plus/Plus Query 47079 TACGATCCGAAGTGGCGCACCGAGGCCGGTTACGGCTCGGCCGGG--CAGGCGAAC-GGT 47135 |||||||||| ||||| | |||||| || | ||||| | || || || || Sbjct 2 TACGATCCGAGTTGGCGAAACGAGGCAGG------CGCGGCCAAGACCAAACGCACCGGC 55 Query 47136 GTGGTGCAGAACGACGACCGCGCCGACTGGCGTGAAGCCTGGGCGCTGTTCCCGGGCGAT 47195 ||||| ||| || ||||| ||||| ||||| || ||||||||||| || ||||||||| Sbjct 56 AAGGTGCTGAATGATGACCGGGCCGATTGGCGCGAGGCCTGGGCGCTCTTTCCGGGCGAT 115 Query 47196 GTCGCCTATGTCTGGCACGGCGCGCTGCATGCCGGCG-TCGTCGAGGCCAGTCTGAAAGC 47254 || |||||||||||||||||||||||||||| ||||| ||| | | || || | | Sbjct 116 GTGGCCTATGTCTGGCACGGCGCGCTGCATG-CGGCGACCGTTGCCGAAAGCCTCGAGGT 174 Query 47255 GGCCGGGTTCGAGACGCGCTCGCAGATCATCTGGGTGAAGCAGCGGCCGGTGTTCTCGCG 47314 || |||| || || || ||||||||||||| ||| |||| |||| | || Sbjct 175 CTGTGGTTTCGCGATCCGGTCTCAGATCATCTGGGCCAAGGAGCGCTTGGTGCTGAGCCG 234 Query 47315 TGGTCACTACCACTGGCAGCACGAACC 47341 ||| | || ||||||||||| ||||| Sbjct 235 GGGTGATTATCACTGGCAGCATGAACC 261 >seq9687 Length=840 Score = 129 bits (142), Expect = 2e-25 Identities = 151/203 (74%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 47508 CACGGAACGCAGAAGCCGGTGGAGTGCATGCGTCGCCCGATCGTCAATAATTCGTCGCCG 47567 ||||| |||||||||||||||| ||||||||||| || |||| || || ||| ||| Sbjct 89 CACGGCACGCAGAAGCCGGTGGCCTGCATGCGTCGGCCCATCGAGAACAACTCGAGCCCG 148 Query 47568 GGACAGGTGGTCTACGACCCGTTCCTGGGCTCCGGCACCACGCTGATCGCCGCCGA---G 47624 || |||| ||||||| || ||| |||| || |||||||||||||| ||||| || | Sbjct 149 GGCCAGGCCATCTACGAGCCTTTCATGGGATCAGGCACCACGCTGATTGCCGCGGAAATG 208 Query 47625 ACCGAAGGCCGCGCCTGCTACGGCTCGGAGCTGTGGCCGGCTTATGTCGATGTCATCGTT 47684 ||| || || | || |||||| ||| || ||||| ||||||||||| ||| Sbjct 209 ACC---GGACGGGTGTGTTACGGCATCGAGTTGAACCCGGCCTATGTCGATGTTGCCGTC 265 Query 47685 CGGCGGTGGCAGGAGTTTACCGG 47707 || |||||||| || ||||| Sbjct 266 ACACGCTGGCAGGACTTCACCGG 288 >seq11014 Length=760 Score = 91.5 bits (100), Expect = 5e-14 Identities = 134/186 (72%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 47523 CCGGTGGAGTGCATGCGTCGCCCGATCGTCAATAATTCGTCGCCGGGACAGGTGGTCTAC 47582 ||||||| |||||||| | ||||||| | || ||| ||||| |||| |||||| Sbjct 1 CCGGTGGCCTGCATGCGCCAGCCGATCGAGAC-AACTCGAGCCCGGGTCAGGCCGTCTAC 59 Query 47583 GACCCGTTCCTGGGCTCCGGCACCACGCTGATCGCCGCCGAGACCGAAGGCCGCGCCTGC 47642 || |||||| |||| || |||||||||||||| || || |||| || || | ||| Sbjct 60 GAGCCGTTCATGGGATCAGGCACCACGCTGATTGCGGCGGAGATGACTGGGCGGGTCTGT 119 Query 47643 TACGG-CTCGGAGCTGTGGCCGGCTTATGTCGATGTCATCGTTCGGCGGTGGCAGGAGTT 47701 | || ||| || || || || |||||||||||| ||| || |||||||| || Sbjct 120 TTGGGTCTC-GAATTGAACCCTGCCTATGTCGATGTCGCCGTCACACGCTGGCAGGACTT 178 Query 47702 TACCGG 47707 ||||| Sbjct 179 CACCGG 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152808313474388