Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq486 91.5 7e-14 seq44 82.4 4e-11 >seq486 Length=7659 Score = 91.5 bits (100), Expect = 7e-14 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 21677 CTGAGCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATC 21736 ||||||||| | ||||| |||||| || ||| ||||||| |||||||| ||||||||| Sbjct 2838 CTGAGCTGCCAGCTCTACCAGCGCTCGGCGGACCTGTTCCTCGGCGTGCCGTTCAACATC 2779 Query 21737 GCCAGCTACGCGCTGCTGACGCACCTCATGGCG 21769 ||||| ||||| | ||||||||| | || ||| Sbjct 2778 GCCAGTTACGCCATCCTGACGCACATGATCGCG 2746 Score = 86.0 bits (94), Expect = 3e-12 Identities = 157/228 (69%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 21316 CATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTG 21375 |||||||||||| ||||| | | | | ||| |||||||||| |||| || ||||| Sbjct 3079 CATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCTCGGCCCGGTCTACGGCAAGCAGTG 3020 Query 21376 GCGCAGCATCCAAG-GC---CCCGATGGAAAGAACATCGACCAGCTGGCCAAGGCACAAG 21431 |||| ||| | || || | || | | ||||||||| | ||| | | Sbjct 3019 GCGC----TCCTGGCGCACGCCGGGCGGGGACACGATCGACCAGATCGCCGGTGTCGTCG 2964 Query 21432 AGCTGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCG 21491 | | | | | | |||| ||| ||||| | || || | || ||||||||||||| Sbjct 2963 ATCAGATCAAGCGCAACCCCGACTCGCGCCGGCTGATTGTCAGCGCGTGGAACGTGGCCG 2904 Query 21492 AGCTCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21539 | |||||||||||||||||| | |||||||| | |||||||||||| Sbjct 2903 AACTCGACCAGATGGCCCTGCCGCCGTGCCACCTGCTGTTCCAGTTCT 2856 >seq44 Length=32007 Score = 82.4 bits (90), Expect = 4e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 21682 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 21741 |||| | |||||||||||| |||||| ||||| |||||||||| |||||||||||| Sbjct 27787 CTGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTTCAACATCGCCTC 27846 Query 21742 CTACGCGCTGCTGACGCACCTCATGGCG 21769 ||| |||||||| ||| | |||||| Sbjct 27847 CTATGCGCTGCTCTTGCAGATGATGGCG 27874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236249860278971