Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq1036 87.8 3e-12 seq44 84.2 3e-11 >seq1036 Length=4296 Score = 87.8 bits (96), Expect = 3e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTTAAAGGCGATC 197672 |||||||||| ||||| | |||| | | | || | || ||| ||| ||| | Sbjct 1691 TGAAACAATACCTTGATTTAATGCGCCATGTATTAGAACACGGCCATAAGAAAACCGACC 1750 Query 197673 GTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAAG 197732 | || || ||||| || | ||| ||||| || |||||||||||||| | | | Sbjct 1751 GCACCGGCACAGGCACCATCAGTGTGTTTGGCTATCAAATGCGTTTTGATTTACAACAGG 1810 Query 197733 GTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGCTGT 197792 | || ||| | || || || || ||| ||| |||||||| ||||| |||||| | |||| Sbjct 1811 GCTTTCCGCTTGTTACCACCAAAAAATGCCATCTGCGTTCGATTATTCATGAATTACTGT 1870 Query 197793 GGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGGC 197852 |||| | | || || ||||||| || ||| |||| || ||||| | || ||| Sbjct 1871 GGTTTTTAAAAGGTGAAACCAACATTGGCTACCTGCAAGAAAATGGCGTATCAATCTGGA 1930 Query 197853 GGGAGTGG 197860 |||||| Sbjct 1931 ATGAGTGG 1938 >seq44 Length=32007 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 ||||| || ||||||||||| ||| || ||| | ||| | |||||||||||||||||| Sbjct 27782 CTTTCCTGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTTCAACATC 27841 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGC----CGGG 198444 || || || || | ||| |||| ||| | || ||||| | || || | ||| Sbjct 27842 GCCTCCTATGCGCTGCTCTTGCAGATGATGGC---GCAGG-TGACGGGGCTCGAAGTGGG 27897 Query 198445 CGATTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAA 198504 ||| ||||| || || || | |||||||| || ||||||||||| ||| | | Sbjct 27898 CGAGTTCATCCACACTTTTGGGGATGCGCATCTCTATTCAAATCATCTGGAACAGACGGA 27957 Query 198505 GCTCCAGCTGACGCGTGAGCCG 198526 || || || | || |||||| Sbjct 27958 CCTGCAATTGTCTCGAGAGCCG 27979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769034213471160