Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq11540 104 6e-18 >seq11540 Length=733 Score = 104 bits (114), Expect = 6e-18 Identities = 174/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 41172 AACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGC 41231 ||||| ||| ||||||| || | ||| | ||||| || | ||| || | || | Sbjct 177 AACAAGGTAATTCTCATTGGTAATCTGGGCCAGGATCCGGATACCCGCTATACCCCGAAT 236 Query 41232 GGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACC 41291 ||| |||||||| ||||| | | | || || |||||| | |||||| || Sbjct 237 GGCAACGCGGTTGTGAATCTCAACCTGGCTACCGATGAAAGTTACAAGGATCGCCAGACT 296 Query 41292 GGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAA 41351 ||| ||| | | ||| ||||||||||| ||||| | ||||| ||| |||| ||| Sbjct 297 GGCCAGATGGTACCGAGAACCGAATGGCACCGGGTTGTGCTGTTCGGCAAGGTGGCGGAA 356 Query 41352 ATTGCTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAACG 41411 | || || | |||||||| |||||| |||||||| || ||||| |||||| ||| Sbjct 357 GTGGCCGGCCAGTACCTGCGTAAAGGTTCCAAGGTGTATATCGAAGGTCGCCTGCAAACC 416 Query 41412 CGTAAATGGCAG 41423 || || |||||| Sbjct 417 CGCAAGTGGCAG 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133183377440472