Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5801 149 8e-31 seq4708 138 1e-27 seq339 111 2e-19 seq6198 98.7 1e-15 seq4240 91.5 2e-13 >seq5801 Length=1198 Score = 149 bits (164), Expect = 8e-31 Identities = 279/404 (69%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 14051 ACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATG 14110 || |||| || ||| ||||| || || || || | | || ||||| | ||| || Sbjct 479 ACAGTGACCTGACGGTCAAAACGGCCCGGCCGTAACAACGCAGGATCAAGCACATCTTTG 420 Query 14111 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCA 14167 ||||| || |||||||||| | | || |||||| ||||| |||||||||||| Sbjct 419 CGGTTTGTGGCCGCGATGATGATCACACCT---TCGTTAGCTTCAAAACCATCCATCTCA 363 Query 14168 GTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCAGGCATACCACCCGCAC 14225 ||| || || |||| ||||||||||| || || || ||| | |||| | | |||| Sbjct 362 ACCAACAGCTGGTTGAGCGTTTGTTCGCGCTCGTCGTTACCGCCGCCATAGC--CAGCAC 305 Query 14226 TGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCAC 14285 || || |||||| || || ||||| ||||| || || ||||||||| ||| | Sbjct 304 CACGGTGACGACCGACCGCATCGATTTCGTCGATAAACACAATACATGGTGCATTCTTCT 245 Query 14286 GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAA 14345 ||| |||||| || || ||||| | |||||||||||||||| ||||| || |||| Sbjct 244 TGGCCTGTTCAAACATGTCACGCACACGGCTGGCACCGACACCCACGAACATTTCAACAA 185 Query 14346 AATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCG 14404 | | | | | | || | | ||| ||||| | || ||||||||||| || || Sbjct 184 AGTCAGACCCCG-AGATGGTAAAGAATGGGACACCCGCCTCGCCCGCGATGGCGCGCGCC 126 Query 14405 AGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACC 14448 || ||||| || ||||| || || ||| | || | |||||| Sbjct 125 AGCAGGGTTTTACCCGTACCCGGAGGTCCTTCAAGCAAGGCACC 82 >seq4708 Length=1380 Score = 138 bits (152), Expect = 1e-27 Identities = 264/383 (69%), Gaps = 12/383 (3%) Strand=Plus/Minus Query 14051 ACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATG 14110 || || | || ||| ||||| ||||| ||||| | || || ||||||| || | Sbjct 733 ACTGTCACCTGACGGTCAAAACGACCCGGGCGCAAAAGCGCCGGATCAAGGACGTCTGGG 674 Query 14111 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTC 14170 |||||||| ||||| | | | |||||| | | ||||| |||||||||||| | Sbjct 673 CGGTTCGTTGCCGCAACAATGATGATGCCTTCATTGGCTTCAAAACCATCCATCTCAACC 614 Query 14171 AAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCAGGCATACCACCCGCACTGC 14228 || || || || | ||||| ||||| |||||||| ||| | | | ||| || | || Sbjct 613 AATAGCTGGTTCAATGTTTGCTCGCGCTCATCATTACCGCCGCC--AAGACCAGCGCCGC 556 Query 14229 GTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACG-- 14286 || ||||| ||||||||||| || || || | |||||| || ||| ||| Sbjct 555 GTGAACGGCCGACCGCGTCAATTTCGTCAATAAAGATGATACAAGGCGCATT---ACGTT 499 Query 14287 -GGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAA 14345 ||| || || || || || || | |||| || ||||| ||||||||||| |||| Sbjct 498 TGGCTTGCTCGAACATGTCGCGGACACGGCTGGCGCCTACACCGACAAACATCTCTACAA 439 Query 14346 AATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCG 14404 ||| | | ||| |||| || ||| |||||| | |||||| || || || |||||| Sbjct 438 AATCAGACCCTGAA-ATTGTGAAGAATGGGACGCCTGCTTCACCAGCAATCGCACGGGCG 380 Query 14405 AGGAGGGTCTTCCCCGTCCCTGG 14427 || ||||| || || || ||||| Sbjct 379 AGAAGGGTTTTACCTGTTCCTGG 357 >seq339 Length=9696 Score = 111 bits (122), Expect = 2e-19 Identities = 255/375 (68%), Gaps = 12/375 (3%) Strand=Plus/Minus Query 14059 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 14118 || ||| ||||| ||||| || || || || || ||| || | || ||||| || Sbjct 3359 CTGACGGTCAAAACGACCGGGACGCAGCAGCGCCGGGTCCAGAACGTCCGGACGGTTGGT 3300 Query 14119 CGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAG 14175 ||| || || | | ||||| | || || ||||||||||||||||| || | Sbjct 3299 CGCTGCAATCAGGATGATGC---TTTCATTGGGCTCAAAGCCATCCATCTCCACCAGCAA 3243 Query 14176 TTGATTGATGGTTTGTTCGCGTTCATCATT-CGCAGGCATACCACCCGCACTGCGTTGCT 14234 || |||| || |||||||| |||||||| | | || | || |||| || || Sbjct 3242 CTGGTTGAGTGTCTGTTCGCGCTCATCATTACCCCCGC-CAAGTCCGGCACCACGATGGC 3184 Query 14235 TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT-TGATTTTCACGGGCAACT 14293 |||||| || ||||| ||||||||||| | ||| || ||| | | ||| | | | Sbjct 3183 GACCGACCGCATCAATCTCATCGATGAAGATGATGCAAGGTGAGTTCTTCTTCGCCTGC- 3125 Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 14353 || || || || ||||| | | |||||||| || |||||||| || ||||| | | Sbjct 3124 TCGAACATGTCGCGCACGCGGCTCGCACCGACGCCTACAAACATTTCAACAAAGTCAGAA 3065 Query 14354 GCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 14412 ||||| || | || ||| || || || | ||| || || ||||| || || || || || Sbjct 3064 CCGGAA-ATCGTGAAGAACGGCACATTCGCTTCGCCTGCAATGGCCCGCGCCAGCAGCGT 3006 Query 14413 CTTCCCCGTCCCTGG 14427 ||| || || ||||| Sbjct 3005 CTTACCAGTACCTGG 2991 >seq6198 Length=1149 Score = 98.7 bits (108), Expect = 1e-15 Identities = 199/291 (68%), Gaps = 6/291 (2%) Strand=Plus/Plus Query 14059 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 14118 || ||| ||||| || || || || | | || |||||| | ||| ||||| || Sbjct 727 CTGACGGTCAAACCGGCCCGGACGCAATAACGCCGGGTCAAGCACATCTGGCCGGTTGGT 786 Query 14119 CGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTG 14178 || || || |||| ||| || | | ||||||||||||||| || || | || Sbjct 787 GGCAGCAATAACAATGATACCTTCATTGCCATCAAAGCCATCCATTTCTACCAGCATCTG 846 Query 14179 ATTGATGGTTTGTTCGCGTTCATCATTCGCA-GGCATACCACCCGCACTGCGTTGCTTAC 14237 || | |||||| ||||| ||||| | || || || ||| |||| || || || Sbjct 847 GTTTAAGGTTTGCTCGCGCTCATCGTGGCCACCGCCTA-AACCGGCACCACGCTGGCGAC 905 Query 14238 CGACGGCGTCAATTTCATCGATGAAAACGATACATGGT--TGATTTTCACGGGCAACTTC 14295 | || || ||||||||||||||||| | |||||| ||| || |||| ||| || Sbjct 906 CTACCGCATCAATTTCATCGATGAAGATGATACAGGGTGATGCTTTT--TTGGCTTGCTC 963 Query 14296 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAA 14346 ||| || || || || | | |||||| ||||| |||||||| || ||||| Sbjct 964 AAACATGTCACGAACACGCGAGGCACCAACACCAACAAACATTTCAACAAA 1014 >seq4240 Length=1484 Score = 91.5 bits (100), Expect = 2e-13 Identities = 189/276 (68%), Gaps = 14/276 (5%) Strand=Plus/Plus Query 14159 TCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCA 14218 |||||||| || || || || | ||||| || || |||||||| | || ||| Sbjct 2 TCCATCTCGACCAGCAGCTGGTTCAGCGTTTGCTCACGCTCATCATTGCC--GCCGCCCA 59 Query 14219 --CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT- 14275 ||||| | ||| ||| || ||||| || || || ||||||||||| || || ||| Sbjct 60 GGCCCGCGCCGCGGTGCCGGCCAACGGCATCGATCTCGTCGATGAAAACAATGCAGGGTG 119 Query 14276 ---TGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACA 14332 | |||| | || ||||| || || ||||| | |||| || || || ||| Sbjct 120 CGTTCTTTTTTGCCTGC----TCAAACATGTCGCGCACGCGGCTGGCGCCAACGCCTACA 175 Query 14333 AACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGC 14391 ||||| || || || | || ||||| || | || ||| || || || | ||||||||| Sbjct 176 AACATTTCGACGAAGTCGGACCCGGAA-ATCGTGAAGAACGGCACATTGGCTTCACCCGC 234 Query 14392 GATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427 ||| || ||||| || | |||||| || || || || Sbjct 235 GATCGCGCGGGCCAGCAAGGTCTTGCCGGTGCCCGG 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618307052496120