Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1978 131 5e-25 >seq1978 Length=2579 Score = 131 bits (144), Expect = 5e-25 Identities = 183/255 (72%), Gaps = 5/255 (2%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 ||||||||| ||| |||||| | | ||||| || ||||||| | || || ||||| Sbjct 319 AAAATGAAGAAAACTGCTGAGGATTTCTTAGGCGAGCCAGTAACAGCAGCAGTAATTACC 260 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 |||||||| || ||||||||||| |||||| ||||| ||||| || ||| | ||||| Sbjct 259 GTACCAGCGTACTTTAATGATGCTCAGCGTCAGGCAACTAAAGACGCAGGCCGGATTGCT 200 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || ||| |||| | | || || || || || |||||||| || | || || || | Sbjct 199 GGCTTAGATGTAAAACGGATTATCAACGAGCCAACTGCTGCGGCGCTGGCTTACGGTATG 140 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 ||||||| || | | || | || ||| ||| ||| |||||||| |||||||| Sbjct 139 GATAAAAAGAAAGGC---GACACCAAGATTGCAGTTTATGACTTAGGTGGCGGTACTTTC 83 Query 349802 GATGTATCACTACTA 349816 || |||| ||| || Sbjct 82 GA--TATCTCTATTA 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514932570856331