Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq13022 127 8e-25 seq5028 96.9 1e-15 >seq13022 Length=660 Score = 127 bits (140), Expect = 8e-25 Identities = 238/344 (69%), Gaps = 18/344 (5%) Strand=Plus/Plus Query 2664 ATTACCTCCGCTTTGTAAAGACCATTGATGCTCTCAGCCATCGCGTTGTCATACGAGTCG 2723 || ||||| || ||||| ||||| ||||| |||| |||||||| |||||||| ||| Sbjct 208 ATGACCTCAGCCTTGTAGAGACCGTTGATTGTCTCGGCCATCGCATTGTCATAGCTGTCA 267 Query 2724 CCTGTACTCCCTGTTGATGCCAGTAATCCGGCTTCTTTTAGTCGCTCCGTATAGGCCAGT 2783 || || || ||| | | | |||||| || || ||||| || || | Sbjct 268 CCGACGCTGCCGACTGACGGATCGATTTTGGCTTCCTTGAGGCGCTCTGTGTACTTGATC 327 Query 2784 GACACATACTGAGAGCCTTTATCGCTGTGATGGAT---GGT---GCCAGACGGACGACGG 2837 |||| ||| ||| |||| | ||||| |||||||| ||| | | || |||| Sbjct 328 GACAGATATTGAACGCCTCTGTCGCTATGATGGATAAGGGTTTTGGGATCTGGTTGACGC 387 Query 2838 GCCCACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCAT----AGACGATGA 2893 ||| |||||| || |||| ||||| ||||| | || || ||| ||| || || Sbjct 388 GCCGCCAACGCTTGATCCAAAGCATCAAGCACCA---TC-TTGGCATTGGGAGAGGAAGA 443 Query 2894 GACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAA 2953 |||| ||| || |||||||| | || || ||||||||||| ||||| ||||| ||||| Sbjct 444 GACCTTCCAGCCAACGATGTAGCGCGCGAAGACATCAATGATGAACGCAACATACACGAA 503 Query 2954 GCC--CTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAG 2995 ||| | || || |||||||| || || ||||| ||||| || Sbjct 504 GCCGACGGC--GGTTCTGACGTAGGTGAAGTCAGCTACCCAGAG 545 >seq5028 Length=1324 Score = 96.9 bits (106), Expect = 1e-15 Identities = 514/804 (64%), Gaps = 38/804 (5%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAG----ACCCGCCA 2902 ||||||||||| ||||||| |||||| | | | | | || || | |||||||| Sbjct 401 GCCTGCTCCAGAGCATCCAACACGAAGGCTGCGTGC---GGCG-TGCGGCTGACCCGCCA 456 Query 2903 CCCCACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCA 2962 || || ||| | ||||| ||||| |||| ||||||||||||||| ||||| ||| Sbjct 457 ACCAACAATGCGGCGCGCAAAGACATCGATGACAAACGCCACATAGACAAAGCCGCCCCA 516 Query 2963 TGTGCTGACGTAAGTAAAATCAGCCACCCAC-AGCTGGTCAGGTCGTTCTGCCACGAACT 3021 ||| ||| || || ||||||| |||||| | | | || || || |||||| ||| | Sbjct 517 TGTCGAGACATAGGTGAAATCAGATACCCACAATCGGTTCGGGGCG-TCTGCCTGGAAGT 575 Query 3022 GACGGTTTACGCGGT--CGCCTGC--GGCAACGGCT--TTCCGGCTGATGGTCGTACGGA 3075 ||||| || || ||| || ||| ||| | || || || ||||| ||| Sbjct 576 TCCGGTTCACCTTGTCACGCGGGCATGGC-GCGGATGGGTCAGG--GACAGTCGTGCGGG 632 Query 3076 CCTTTTTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTAC 3135 | || || || || | ||| ||| || || ||| | || |||| || | Sbjct 633 CTTTCTTGCCACGTCTGATCCCGCGAAGCTGCAGCTCCCGCATCAAGCGCTCCACCGTGC 692 Query 3136 ATCTGGCCACCCTGATTCCTTCCCGTAACAACTGACGCCAGACTTTACGCACACCGTACA 3195 | | ||||| | |||||||| | || ||| |||| || || | || || | Sbjct 693 AGCGCGCCACAGCAAAGCCTTCCCGCACCATCTGGTGCCACACCTTCTTGGCCCCATAGA 752 Query 3196 CCTGATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCG 3255 ||| || || | ||| | || |||| ||||| |||||| | || |||| Sbjct 753 CCTCGTGGTTCGCTTCGAAGACCCGCTTGATCTCAGGCTTCAGGATCGCATCTCGCTGAA 812 Query 3256 CACGGGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGACA--ATGGTAATACGTTGA 3313 |||| || | | || |||| ||| || || ||| || | ||| | || || Sbjct 813 CACGCGCCGGGGCGGTCTCGGGATAATGCAGCCGT--CTGTCATGCTCGTAGAATGTCGA 870 Query 3314 CGGGGCAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCACGCAGCTTATC 3373 |||||||| |||| | ||||| | ||| ||||||| ||| | || || | | || Sbjct 871 TGGGGCAATCGGCAGAACCCTGCAAATCGGCTCGACCCCATACAGATCGCGATGGTCATT 930 Query 3374 CAGCAGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAA 3433 | | | | |||| ||| ||||||||| |||||||| ||||||||| || || Sbjct 931 GATGAACGCCGTCATCGCTTCAGTGGGCGGTCGAGCTCCGCCTGCGCAAAATATGCTGAC 990 Query 3434 GCCTGGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTT----TCACGTTCCAGCTC 3489 |||| || | ||| || ||| | || ||||| ||| || || |||||| | Sbjct 991 GCCTTACGTAAGATCTCATTAGCCTGACGAAGTTC----TTTCACCTCGCGCTCCAGCGC 1046 Query 3490 TTTCAGACGCTGACGTTCAGCGCTGGTGAGCCCACCATCACCGC-CCCCGGTATCCCGCT 3548 || | || || ||| || |||| | || | |||| || | ||| |||| Sbjct 1047 CTTGATCTGCGCTCGCTCATCGGTGGTTGGACCCGC----CCGCTTGCCAGCATCACGCT 1102 Query 3549 CATGCTGGCG-AACCCAGACACGCAGAGTCTCCGGCGTACAGCCAATCTTTGGGGCAATG 3607 || ||| ||| ||||| | |||| || | ||||| ||||| ||||| | ||| Sbjct 1103 CA-GCTTGCGTCACCCAAGTATGCAGCGTTTGCGGCGAGCAGCCGATCTTGCCTGAAATC 1161 Query 3608 GAACAAATTGCCGCCCACTGTGAG 3631 || ||| | |||||| || ||| Sbjct 1162 GAGACAATAGTCGCCCATTGCGAG 1185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203254927664410