Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq486 118 9e-22 seq13573 93.3 3e-14 >seq486 Length=7659 Score = 118 bits (130), Expect = 9e-22 Identities = 176/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 29853 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTC 29912 |||| | ||||||||| || |||| | | || |||| | ||||| ||| || || | Sbjct 2643 GCTCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGC 2702 Query 29913 CCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGA 29972 | | | |||| || || || ||| | | | || || || || || ||||||| ||| | Sbjct 2703 CGAAGGTGTGCACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTCA 2762 Query 29973 GGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGT 30032 ||| | ||| ||||||||||| || || || ||||| || |||| |||| | ||||| Sbjct 2763 GGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGGT 2822 Query 30033 AGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAG 30092 ||||||| || |||| ||| || ||||| ||||| ||| ||||||||| | Sbjct 2823 AGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGGAACAGCAGGTGGCACGGCG 2882 Query 30093 GAAGAGCCAT 30102 | || ||||| Sbjct 2883 GCAGGGCCAT 2892 >seq13573 Length=635 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 29902 GTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29961 ||| ||||| || | ||||||||||||||||||| |||| ||| || | | ||||| Sbjct 429 GTGCGCGTCGCCGAATGTGTGGACAAACTCTCCCGGCTCTAACCCTGTTGCTCGCGCCAT 370 Query 29962 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 30021 ||| ||| || | || ||| ||||| || || || || || || | || | Sbjct 369 CATCATCGTCAGCAAAGCATAGGATGCGATATTGAACGGGACACCAAGGAAGACATCAGC 310 Query 30022 CGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGC 30081 ||| | || ||||||||||| |||| |||||| | |||| ||||||| ||| | Sbjct 309 CGAACGTTGATAGAGCTGACAATTTAGCTTTCCGTCCATAACGTTAAACTGAAACAGGCA 250 Query 30082 GTGGCACGGAGGAAGAGCCAT 30102 |||||| || || || ||||| Sbjct 249 GTGGCATGGCGGCAGCGCCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406228312221084