Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq14329 109 5e-19 seq5001 105 6e-18 >seq14329 Length=599 Score = 109 bits (120), Expect = 5e-19 Identities = 210/308 (68%), Gaps = 10/308 (3%) Strand=Plus/Minus Query 101357 GATGAAAGTATATCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGGTCGTCCAGTTCA 101416 ||||||| ||| |||| |||||||| || || || | || ||| || ||| | Sbjct 563 GATGAAAACCTATTTGGTCGGTGGCGCAGTGCGCGACAAATTACTTGGTATCCCGGTTAA 504 Query 101417 TGACCGTGATTACGTGGTTGTGGGTGCAACACACGAAGAGATGATTGAAAAAGGTTTCAC 101476 || || || | ||||| || || ||||| | || || ||| | | | |||| | ||| Sbjct 503 GGATCGCGACTGGGTGGTGGTCGGCGCAACGCCTGAGGAAATGGTCGCAGAAGGATACAC 444 Query 101477 CCAGGTTGGCGCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACT 101536 | ||| ||| || |||||||||| |||||||||| || ||||||||||| || || Sbjct 443 GCCGGTCGGCAGTGACTTCCCGGTGTTTCTGCATCCTGAGACAAAAGAAGAATATGCCCT 384 Query 101537 GGCCCGTACTGAGCGTAAAACTGGTGAAGGCCATACTGGCTTTGAGACCTT-----CTTC 101591 ||| | || || || || | || | || ||| ||||| ||||| |||| Sbjct 383 GGCAAGAACGGAACGCAAGTCGGGCAAGGGTTATAAAGGCTT---CACCTTTCATACTTC 327 Query 101592 AGCCCGGATGTAACTCTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATG 101651 | || ||||| | |||||||| || ||| |||||||| | || |||||||| || Sbjct 326 A--CCTGATGTGAGCCTGGAAGATGACTTAATCCGTCGTGATTTAACCATCAATGCCATT 269 Query 101652 GCTAAAGA 101659 || |||| Sbjct 268 GCCGAAGA 261 >seq5001 Length=1325 Score = 105 bits (116), Expect = 6e-18 Identities = 127/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 101493 TTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTGGCCCGTACTGAGCGT 101552 || ||||| | | |||| || |||||||||||||| | || ||||||||||| ||||| Sbjct 1121 TTTCCGGTATTCCTGCACCCAAAAACCAAAGAAGAACATGCTCTGGCCCGTACCGAGCGC 1062 Query 101553 AAAACTGGTGAAGGCCATACTGGCTTTGAGACCTTCTTCAGC-CCGGATGTAACTCTGGA 101611 |||| |||| ||||| |||| |||||| || | | | || || ||||| || ||||| Sbjct 1061 AAAAATGGTAAAGGCTATACCGGCTTT-AGTGTCTATGCCGCACCAGATGTTACGCTGGA 1003 Query 101612 AGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGCTAAAGACA 101661 ||||||| || ||||| | || || ||||| || ||||| |||| Sbjct 1002 GCAGGATTTGCAACGGCGTGATTTAACCATTAATGCTATCGCTAAGGACA 953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457335614703240