Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq9616 302 5e-77 seq15666 251 9e-62 seq10300 170 2e-37 seq9663 96.9 4e-15 seq15657 87.8 2e-12 >seq9616 Length=845 Score = 302 bits (334), Expect = 5e-77 Identities = 392/542 (72%), Gaps = 0/542 (0%) Strand=Plus/Plus Query 176554 GGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATG 176613 || |||||| |||| |||||||||||| || || ||| || || |||||||||||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 176614 TTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCA 176673 || |||||||||||||| |||| |||| ||||||| |||||||| || | ||||||||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 176674 GGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTT 176733 | ||| || || |||||||| ||| || ||||| ||| | || ||||| || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 176734 GTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAA 176793 || ||||||| | | | |||| || | || || | ||||||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 176794 GAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCT 176853 |||||||| | ||| ||| ||||| || ||||||||| | || || |||||||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 176854 TCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATC 176913 || || ||||||||||| | ||||||||||| ||||||| ||||| | | || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 176914 TGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAAC 176973 ||||| || | | || || | |||||||| || ||| | || ||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 176974 CAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGT 177033 | || | ||||| ||| | | ||| ||||||| || || ||||| | Sbjct 428 GAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGA 487 Query 177034 GCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTT 177093 ||| |||| ||||||||||| ||||| ||| | ||||| |||||||||||||| || || Sbjct 488 GCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTA 547 Query 177094 GC 177095 || Sbjct 548 GC 549 >seq15666 Length=534 Score = 251 bits (278), Expect = 9e-62 Identities = 377/533 (71%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 176554 GGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTT-AT 176612 || |||||| |||| |||||||||||| || || ||| || || ||||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 176613 GTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGC 176672 ||| |||||||||||||| ||||||||| |||||||||||||||| || | |||||||| Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 176673 AGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACT 176732 || ||| ||||| |||||||| ||| || ||||| ||| | || ||||| || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 176733 TGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGA 176792 || ||||||| | | | |||| || | || || | || | ||| || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 176793 AGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGC 176852 |||||||| | ||| ||| ||||| || ||||||||| | | || |||||||| | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 176853 TTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCAT 176912 | || || ||||||||||| || ||||||||||| ||||||| ||||| | | || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 176913 CTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAA 176972 ||||| || | | || | | || ||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 176973 CCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCG 177032 | || | ||||| | | | | ||| ||||||| || || ||||| | Sbjct 422 TGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAG 481 Query 177033 TGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCAC 177085 ||| |||| ||||||||||| ||||| ||| | ||||| ||| ||||||||| Sbjct 482 AGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 170 bits (188), Expect = 2e-37 Identities = 287/414 (69%), Gaps = 1/414 (0%) Strand=Plus/Minus Query 176682 TGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGA 176741 ||| |||||||| ||| || ||||| ||| | || ||||| || || || || Sbjct 709 TGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGA 651 Query 176742 GACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATA 176801 |||| | | | |||| || | || || | ||||||||| || || |||||||| Sbjct 650 GACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATA 591 Query 176802 CAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAA 176861 | ||| ||| ||||| || ||||||||| | || || ||||| || | | || || Sbjct 590 TAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAA 531 Query 176862 TAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTAC 176921 |||||||||||||| ||||||||||| ||||||| ||||| | | || ||||| || Sbjct 530 CAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCAC 471 Query 176922 TGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGT 176981 | | || || | |||||| | || ||| | || || | |||||||| | || | Sbjct 470 CTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACT 411 Query 176982 CTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCT 177041 ||||| ||| | | ||| ||||||| || || ||||| | ||| |||| Sbjct 410 TGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCT 351 Query 177042 TGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 177095 ||||||||||| ||||| ||| | ||||| ||| |||||||||| || || || Sbjct 350 AGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq9663 Length=843 Score = 96.9 bits (106), Expect = 4e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 176530 GCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGC 176589 ||||| ||| | || || || | || |||||| |||| |||||||||||| || || Sbjct 217 GCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGT 276 Query 176590 ATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCAC 176649 ||| || || || ||||||| ||| |||| |||||| || |||||||| || ||||| Sbjct 277 ATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATGCTCGTGCAC 336 Query 176650 CCATTCCA 176657 |||||||| Sbjct 337 CCATTCCA 344 >seq15657 Length=537 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 176530 GCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGC 176589 ||||| ||| | || || || | || |||||| |||| |||||||||||| || || Sbjct 32 GCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGT 91 Query 176590 ATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACA 176635 ||| || || |||||||||||||| |||||||||||||| |||| Sbjct 92 ATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603369348416640