Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq3902 122 1e-22 >seq3902 Length=1579 Score = 122 bits (134), Expect = 1e-22 Identities = 162/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 154023 TAAGTTCAATACTGAATTTGTTCCAGCAGAAAATCTCGGCGTTAAAAATGCTAAATGGGA 154082 || ||| ||||| || ||||| || |||||||| || |||||||| |||||||||||||| Sbjct 1044 TATGTTTAATACCGAGTTTGTGCCGGCAGAAAACCTGGGCGTTAAGAATGCTAAATGGGA 985 Query 154083 TGCAAAAGATGGTTTATAT-GTCCCAAGGGACGTGTATAATAGTTATTTCTATGTCGTCG 154141 ||||||| ||| | || || | || ||||| ||||| ||||| || | Sbjct 984 CCGGGAAGATGG-CTATCTGGTGCCGCGCGATTGCTATAACTCGTATTTTTATGTGGTAG 926 Query 154142 AAGATGAAGAAACGAATCCTCTGGATAAATTCATACTTCACGGTAAAGATGTTATTC-AG 154200 ||||||| | | ||| | |||||||||||| || ||||| || |||| || | Sbjct 925 AAGATGAGCAGAGTAATACCCTGGATAAATTCCAGCTGCACGGCCGTGA-GTTACTCGAT 867 Query 154201 TATCTTGATGGTGGCTCCGCTCTGCATTTGAATCTTGACG 154240 ||||| ||||||||||| || |||||||| || || |||| Sbjct 866 TATCTGGATGGTGGCTCGGCCCTGCATTTAAACCTGGACG 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582615249816600