Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq157 324 6e-84 seq7919 210 1e-49 seq10837 188 3e-43 seq163 170 9e-38 seq13113 140 2e-28 seq439 134 6e-27 >seq157 Length=15381 Score = 324 bits (358), Expect = 6e-84 Identities = 507/718 (71%), Gaps = 13/718 (2%) Strand=Plus/Plus Query 64118 GGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCAC 64177 ||||| || | || ||||||||||| || || || || ||| | || || ||| | Sbjct 13753 GGCCGCGTCATCGAGATCTACGGCCCTGAGTCCTCTGGCAAGACCACCCTCGCGCTCACC 13812 Query 64178 GCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTC 64236 ||| ||| ||| ||| |||||| || ||| |||||||| ||||||||| |||||| | Sbjct 13813 GCGCTGGGCAACTGC-CAGAAGAAGGGCGGCGTCGCCGCCTTCATCGACGCCGAGCACGC 13871 Query 64237 CCTGGACCCTGAGTACGCCAAGGCGC-TCGGTGTGGACCTCGACAACCTCGTGGTGGTTC 64295 ||| ||||| | ||| ||||| |||| || || ||||| |||| | || | Sbjct 13872 CCTCGACCCGTCCTGGGCCC-GGCGCCTCGGCGTCAACATCGACGACCTGCTCGTCAGCC 13930 Query 64296 AGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGC 64355 ||||| | | ||||| | ||||| |||||| || || |||||| || || Sbjct 13931 AGCCGAGCTCCGGCGAAGAAGCCCTTGAGATCTGCGAACTGCTCGTCCGCTCCAACGCCG 13990 Query 64356 TGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 64415 || | |||||||||| ||||| || || || || ||||| |||||||| |||||||||| Sbjct 13991 TGGACCTCGTCGTCGTCGACTCGGTCGCCGCTCTCGTGCCCCGCGCCGAACTCGAAGGCG 14050 Query 64416 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 64475 | || || || || |||||||| || || || ||||||||||||||| ||||||||| Sbjct 14051 AAATGGGCGATTCCCATGTCGGCCTTCAGGCCCGACTCATGTCGCAGGCCCTGCGCAAGC 14110 Query 64476 TCACCGGCACCATCTCC---AGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 64532 |||||||| | ||| || |||| | ||| | | ||| |||| ||| | || | Sbjct 14111 TCACCGGCGCGATCGCCAAGAGCAGCTGCACCGTCA---TCTTCATCAATCAGATCCGAG 14167 Query 64533 AGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGA 64592 | |||||||| |||| | |||| || ||| |||||||| |||||| ||| ||| Sbjct 14168 AAAAGATCGG---CGTGATGTTCGGCTCGCCCGAAACCACCACCGGCGGCCGGGCCCTGA 14224 Query 64593 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATG 64652 ||||||| | || ||||||| ||||| || |||||| | || ||||||||||||| Sbjct 14225 AGTTCTACTCGTCGATCCGCATCGATGTGCGCCGCATCTCGTCCATCAAGGAAGGCGATG 14284 Query 64653 AGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACC 64712 || |||||||||||| ||| | ||||| |||||||| || ||| ||||| | Sbjct 14285 AGAACGTCGGCAACCGCGTCCGCGCCCGAGTCGTGAAGAACAAACTCGCCGCGCCGTTCA 14344 Query 64713 GCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCG 64772 |||||||||| | || ||| | ||||||||||| | | ||| ||| ||| Sbjct 14345 AATCCGCCGAGTTCGACATCATGTTCAACGAGGGCATCTCCCTCACAGGCGACCTCGTCG 14404 Query 64773 ACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGA 64830 |||| | ||| | | ||| | || | ||||| || | ||||||| ||||| || Sbjct 14405 ACCTCGGCGTCACCGAAGGCATCGTCGACAAGTCCGGATCGTGGTTCAGTTACGGCGA 14462 >seq7919 Length=968 Score = 210 bits (232), Expect = 1e-49 Identities = 394/574 (69%), Gaps = 10/574 (2%) Strand=Plus/Minus Query 64016 GGATCGGCTATGAAGCTGGGTGACAAGCC--ACA-GACTGTGGACGTCATTCCCACCGGC 64072 || |||| ||||||||||| | |||||| ||| | | | || | ||| ||||||| Sbjct 570 GGCTCGGTCATGAAGCTGGGAGCCAAGCCCAACATGGATATCGAGGCGATTTCCACCGGT 511 Query 64073 TCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAA 64132 || ||| |||||| || || || | ||||| ||| | |||||| | || ||| Sbjct 510 TCACTCGGGCTGGACATTGCACTCGGTGTTGGGGGTCTCCCCAAGGGCCGCATCGTTGAA 451 Query 64133 ATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCG 64192 || || ||||| || || || ||| | || || || ||| ||||||| | Sbjct 450 ATTTATGGCCCCGAGAGCTCTGGCAAGACGACGCTCGCGCTGCACACGGTGGCAGAGTGT 391 Query 64193 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTAC 64252 ||||||||||| |||| ||||||| | ||||| |||||| | || ||||| | || Sbjct 390 CAGAAGGCCGGCGGCACAGCCGCCTTTGTTGACGCGGAGCACGCGCTCGACCCGGTCTAT 331 Query 64253 GCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAG 64312 |||||| ||| ||||||||| || | | ||| ||||| |||||| ||| | || || Sbjct 330 GCCAAGAAGCTGGGTGTGGACGTCAGCGAACTCCTGGTGTCTCAGCCTGACGCCGGTGAA 271 Query 64313 CAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTT 64372 ||||| ||||| |||| |||| || || ||||||| | | | | | || | Sbjct 270 CAGGCGCTGGAAATCGCTGACACGCTGGTGCGCTCTGGCGCGATCGACGTACTGGTGATC 211 Query 64373 GACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCAC 64432 ||||| ||||| |||||| |||||||| || |||||||| || || || ||| || | Sbjct 210 GACTCGGTGGCTGCCCTGACCCCGCGCGCTGAACTCGAAGGTGAGATGGGTGAC--TCGC 153 Query 64433 GTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCT 64490 | || ||||| || || || ||| ||||| |||| ||||| |||| |||||| Sbjct 152 TGCCGGGTCTGCAGGCTCGTCTGATGAGCCAGGCGCTGCGTAAGCTGACCGCGTCCATCT 93 Query 64491 CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGG 64550 ||| |||| |||||| | ||| |||||||| | || |||||| || ||| Sbjct 92 CCAAGTCCAATACGCTGGTGATCTTCATCAACCAGATCCGGATGAAGATTGG---TGTGA 36 Query 64551 GCTACGGCCCGAACGAGACCACCACGGGCGGCAA 64584 | |||| || || |||||||| ||||| || Sbjct 35 TGTTCGGCTCGCCGGAAACCACCACTGGCGGTAA 2 >seq10837 Length=771 Score = 188 bits (208), Expect = 3e-43 Identities = 364/531 (69%), Gaps = 17/531 (3%) Strand=Plus/Minus Query 64295 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 64354 || || ||||| ||||||||||| || ||||||| ||| || || || |||| Sbjct 718 CAACCAGACACAGGCGAGCAGGCGCTTGAGATCGCCGACACGCTGGTGCGCTCCGGCG-- 661 Query 64355 CTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAG 64412 | ||| | | | || || ||| |||||| |||||| ||||||||||||| | |||| Sbjct 660 CCGTCGAGGTGCTGGTGGTCGACAGTGTGGCCGCCCTGACGCCGCGCGCCGAGTTGGAAG 601 Query 64413 GCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCA 64472 |||| || || |||| || ||||||||||| ||||| | ||| ||||| |||||| Sbjct 600 GCGAGATGGGTGACACCCATGTCGGCCTGCAGGCGCGGTTGATGAGCCAGGCGCTGCGCA 541 Query 64473 AGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 64532 |||||||||| | ||||| | | ||| || | | | |||| ||| | ||| Sbjct 540 AGCTCACCGGGTCGATCTCGCGGTCGAACTGCATGGTGATTTTCATCAATCAGATTCGCA 481 Query 64533 AGAAGATCGGCAACGTGGGCTACGG----CCCGAACGAGACCACCACGGGCGGCAAGGCT 64588 ||||||||| ||| | ||| |||||| ||||| || |||||||| || Sbjct 480 TGAAGATCGG---TGTGATGTTCGGTAATCCCGAA----ACCACAACCGGCGGCAATGCG 428 Query 64589 TTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGC 64648 ||| || ||| |||| || ||| | ||| | || || |||| ||||| | Sbjct 427 CTGAAATTTTACTCCTCCGTGCGCCTCGATATTCGCCGGATCGGTCAAATCAAGGATAGT 368 Query 64649 GATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 64708 || |||| || ||||||| ||||| || || |||||||||||| |||| |||||| Sbjct 367 GACGAGGTCGTTGGCAACCAGACCCGTGTCCGCGTGGTCAAGAACAAGGTGGCGCCGCCG 308 Query 64709 CACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACT 64767 ||| | | ||| ||| | || |||| || || ||||| || | || || |||| | Sbjct 307 TTCCGGACTGTCGAATTCGACATCATGTATGGCGAAGGCATTTC-CAAGATGGGCGAATT 249 Query 64768 CCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 64818 |||||||| | |||| | || | || |||| |||||| ||||||| Sbjct 248 GCTCGACCTCGGCGTGAAGGCCGGTATCGTCGAGAAATCGGGCTCCTGGTT 198 >seq163 Length=14829 Score = 170 bits (188), Expect = 9e-38 Identities = 408/616 (66%), Gaps = 11/616 (2%) Strand=Plus/Minus Query 64223 GACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAAC 64282 ||||| || || | || || || | ||||||||| || ||||| || || ||| | Sbjct 11338 GACGCGGAACATGCGCTTGATCCGCAATACGCCAAGAAACTGGGTGTCGATCTTGACGAG 11279 Query 64283 CTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTC 64342 || || | ||||| ||||||||||| || || || |||||||| || || ||| Sbjct 11278 CTTCTGATCTCGCAGCCCGACACTGGCGAACAAGCGCTCGAGATCGTGGATACGCTGGTC 11219 Query 64343 AAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCC 64402 ||||||| | | | | ||||| | ||||| || || || || |||| || Sbjct 11218 CGATCTGGCGCGGTTAGCCTTGTCGTTATCGACTCGGTTGCTGCGCTCACGCCGAAATCC 11159 Query 64403 GAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAG 64462 ||||| || |||||||| || ||||| |||||| | || || ||||| ||| || Sbjct 11158 GAGCTTGAGGGCGACATGGGCGACAGCAGTGTCGGCGTACATGCACGCCTGATGAGCCAA 11099 Query 64463 GCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAAC 64522 || ||||| || |||||| || | || || | ||||| || | ||| ||||| Sbjct 11098 GCGATGCGGAAACTCACCAGCTCGATTTCGCGGTCCAACTGCATGGTGATCTTCATCAAC 11039 Query 64523 CAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGC 64582 ||| | ||| |||||| || |||| | |||| ||| || || || || ||| Sbjct 11038 CAGATCCGCATGAAGATTGG---CGTGATGTTCGGCAGTCCCGAAACGACTACCGGTGGC 10982 Query 64583 AAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAG 64642 || ||| | | |||||| ||| || || |||| |||| ||||||| | ||| Sbjct 10981 AATGCTCTCAAATTCTACAGCTCGGTGCGTTTGGACATCCGCCGCATCGGTGCAATCAAG 10922 Query 64643 GAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCC 64702 || |||| || | || |||||| |||||| ||||| || ||||| |||||| | || Sbjct 10921 GACCGCGACGAAGTGGTGGGCAACGCCACCCGCGTGAAAGTGGTCAAAAACAAGGTTGCA 10862 Query 64703 CCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC 64762 |||||| | | | || ||| | || |||| || || |||||||| | Sbjct 10861 CCGCCGTTCAAGCAGGTGGAATTCGACATCATGTATGGCGAAGGCATCTCCAAAACCGGA 10802 Query 64763 GAACTCCTCGACCTGGCCGTGTCGCAGGGCC----TGGTGAAGAAGTCGGGCGCCTGGTT 64818 ||| | ||||||| | ||| || |||| |||| |||| ||||| || |||| Sbjct 10801 GAATTGATCGACCTTGGCGT----CAAGGCCGGTGTGGTCGAGAAATCGGGTGCATGGTA 10746 Query 64819 CAAGTACGGGGACAAG 64834 | ||||||||| || Sbjct 10745 CTCCTACGGGGACGAG 10730 >seq13113 Length=655 Score = 140 bits (154), Expect = 2e-28 Identities = 237/339 (70%), Gaps = 11/339 (3%) Strand=Plus/Minus Query 64373 GACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCAC 64432 || ||||||||||| ||| |||||| || || || ||||| || || || || |||| Sbjct 572 GATTCTGTGGCGGCTCTGACGCCGCGTGCAGAACTTGAAGGTGAAATGGGCGAT--TCAC 515 Query 64433 GTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCT 64490 | ||| |||| ||||| || ||| ||||| |||| ||||| || | | | |||| Sbjct 514 TGCCCGGCTTGCAGGCGCGTCTGATGAGCCAGGCATTGCGGAAGCTGACAGCCTCGATCT 455 Query 64491 CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA--ACGT 64548 | | |||| ||| || | ||| |||||||| | || ||||||||| | || Sbjct 454 CGAAATCCAATACGATGGTGATCTTCATCAACCAGATTCGGATGAAGATCGGTGTGATGT 395 Query 64549 GGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGT 64608 | || ||||| || ||||| || || || || || ||| ||| || ||||| || Sbjct 394 TTGGTA--GCCCG---GAAACCACAACAGGTGGTAACGCGCTGAAGTTTTATGCCTCTGT 340 Query 64609 CCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCG 64668 || | ||| | |||||||||| || ||||| ||||||||| || ||||||| Sbjct 339 GCGTCTTGATATTCGTCGCATCGGTGCCATCAAGGACCGCGATGAGGTGGTGGGCAACCA 280 Query 64669 CACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 64707 ||||| | ||||| |||||||||||||| || || || Sbjct 279 GACCCGTATCAAGGTGGTCAAGAACAAGCTTGCGCCACC 241 >seq439 Length=8113 Score = 134 bits (148), Expect = 6e-27 Identities = 406/619 (66%), Gaps = 21/619 (3%) Strand=Plus/Plus Query 64221 TCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACA 64280 ||||||| || ||| | || || || |||| || ||| || || ||||| || || Sbjct 1754 TCGACGCGGAACACGCGCTTGATCCGCAGTATGCGAAGCGTCTTGGCGTGGATCTGGATG 1813 Query 64281 ACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCG 64340 | || | | ||||| || || || || ||||| || || |||||||| | | Sbjct 1814 AGCTGCTAATTTCCCAGCCTGATACCGGTGAACAGGCTCTCGAAATCGTTGATACGTTAG 1873 Query 64341 TCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCG 64400 | || |||| | | ||| || || || || || || ||||| || ||| Sbjct 1874 TGCGTTCCGGCGCGGTCAGCATGGTTGTTGTCGATTCGGTTGCGGCTTTGACGCCCAAAT 1933 Query 64401 CCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGC 64460 | ||||||||||||||||| || ||||| |||||| ||||||| ||||| ||| | Sbjct 1934 CGGAGCTCGAAGGCGACATGGGCGACAGCTCGGTCGGCGTGCACGCCCGCCTGATGAGCC 1993 Query 64461 AGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAAC---ACGCTGACGCTCTGGG 64517 | || ||||||||||| ||||| |||| | | || | || | | | | Sbjct 1994 AAGCTATGCGCAAGCTGACCGGTTCCATTAACCGTTCCGGCTGTACCGTTA---TTTTCA 2050 Query 64518 TCAACCAGTTGCGCGAGAAGATCGGC--AACG-TGGGCTACGGCCCGAACGAGACCACCA 64574 | ||||| | || ||| |||||| || | | |||| ||||||| ||||| | Sbjct 2051 TTAACCAAATTCGGATGAAAATCGGCGTAATGTTTGGCT--CGCCCGAA----ACCACGA 2104 Query 64575 CGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCA 64634 |||| || || || | | ||||||| | || || || | ||| | |||||||||| | Sbjct 2105 CGGGTGGTAACGCGCTCAAGTTCTACTCTTCGGTTCGGCTTGATATTCGTCGCATCGGCG 2164 Query 64635 CCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACA 64694 | ||||| | || || || |||||| ||||| ||||| |||||||| |||| Sbjct 2165 CTCTCAAGGATCGTGACGAAATCGTGGGCAACGCGACCCGTGTGAAAGTCGTCAAAAACA 2224 Query 64695 AGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGC 64754 | | || ||||| | | | || ||| | || ||||||| || |||||||| Sbjct 2225 AAGTTGCGCCGCCCTTCAAACAGGTGGAATTCGACATCATGTACGGTGAAGGCATCTCCA 2284 Query 64755 GTGAGGTCGAACTCCTCGACCTGGCCGTGTC---GCAGGGCCTGGTGAAGAAGTCGGGCG 64811 || || || || ||||||| ||||| ||| ||| |||| | ||||| || | Sbjct 2285 AAATGGGTGAGCTGCTTGACCTGG--GTGTCAAGGCA-GGCGTGGTCGACAAGTCCGGTG 2341 Query 64812 CCTGGTTCAAGTACGGGGA 64830 | ||||||| ||||| || Sbjct 2342 CGTGGTTCAGCTACGGTGA 2360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232756166260247