Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq317 84.2 2e-11 seq8958 82.4 6e-11 >seq317 Length=10205 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 40673 GAGAGGATTTGAACCTCTGACCTCTCCCTTAGGAGGGGAGCGCTCTATCCTGCTGAGCTA 40732 ||||||||| ||||||||| ||||| |||| |||||| |||||||||||| ||||||||| Sbjct 10195 GAGAGGATTCGAACCTCTGGCCTCTGCCTTCGGAGGGCAGCGCTCTATCCAGCTGAGCTA 10136 Query 40733 C 40733 | Sbjct 10135 C 10135 >seq8958 Length=888 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 104829 GGAGTACTAATAAAGATTGCTTTACTATTTGGTTTATCCAGAGTAGGACGTAAAGCCACC 104888 || ||| ||||||||||||||| || ||||| ||||| || ||||| | ||| || | Sbjct 342 GGTGTAGAAATAAAGATTGCTTTGCTGTTTGGCTTATCTAGTGTAGGTCTTAACGCAATA 401 Query 104889 ATGAACGCCTTACCACCCTTGTCTGAAAGAGCAGCTTCGTCAAATACTATTAAGTCGTAA 104948 | || || | |||| ||||| ||| || || || || |||| || | ||| ||| Sbjct 402 TTAAAAGCTGTTTCACCTGCGTCTGTAAGTGCGGCCTCATCGAATATAATAAGGTCATAA 461 Query 104949 GAACGACCAACCGCAGAGTC 104968 ||||| ||||| ||||||| Sbjct 462 GAACGTCCAACAACAGAGTC 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 371441741648203