Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq157 295 3e-75 seq7919 201 5e-47 seq10837 170 9e-38 seq13113 149 3e-31 seq439 140 2e-28 >seq157 Length=15381 Score = 295 bits (326), Expect = 3e-75 Identities = 503/720 (70%), Gaps = 17/720 (2%) Strand=Plus/Plus Query 66524 GGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCAC 66583 ||||| || | || ||||||||||| || || || || ||| | || || ||| | Sbjct 13753 GGCCGCGTCATCGAGATCTACGGCCCTGAGTCCTCTGGCAAGACCACCCTCGCGCTCACC 13812 Query 66584 GCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTC 66642 ||| ||| ||| ||| |||||| || ||| |||||||| ||||||||| |||||| | Sbjct 13813 GCGCTGGGCAACTGC-CAGAAGAAGGGCGGCGTCGCCGCCTTCATCGACGCCGAGCACGC 13871 Query 66643 CCTGGACCCTGAGTACGCCAAGGCGC-TCGGTGTGGACCTCGACAACCTCGTGGTGGTTC 66701 ||| ||||| | ||| ||||| |||| || || ||||| |||| | || | Sbjct 13872 CCTCGACCCGTCCTGGGCCC-GGCGCCTCGGCGTCAACATCGACGACCTGCTCGTCAGCC 13930 Query 66702 AGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGC 66761 |||| ||||||| | ||||| |||||| || || |||||| || || Sbjct 13931 AGCCGAGCTCCGGCGAAGAAGCCCTTGAGATCTGCGAACTGCTCGTCCGCTCCAACGCCG 13990 Query 66762 TGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 66821 || | |||||||||| ||||| || || || || ||||| |||||||| |||||||||| Sbjct 13991 TGGACCTCGTCGTCGTCGACTCGGTCGCCGCTCTCGTGCCCCGCGCCGAACTCGAAGGCG 14050 Query 66822 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGC 66881 | || || || || |||||||| || || || |||||||| |||||| ||||||||| Sbjct 14051 AAATGGGCGATTCCCATGTCGGCCTTCAGGCCCGACTCATGTCGCAGGCCCTGCGCAAGC 14110 Query 66882 TCACTGGCACCATCTCC---AGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 66938 |||| ||| | ||| || |||| | ||| | | ||| |||| ||| | || | Sbjct 14111 TCACCGGCGCGATCGCCAAGAGCAGCTGCACCGTCA---TCTTCATCAATCAGATCCGAG 14167 Query 66939 AGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGA 66998 | |||||||| |||| | |||| || || |||||||| ||||| ||| ||| Sbjct 14168 AAAAGATCGG---CGTGATGTTCGGCTCGCCCGAAACCACCACCGGCGGCCGGGCCCTGA 14224 Query 66999 GGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATG 67058 ||||||| | || |||| || ||||| || |||||| | || ||||||||||||| Sbjct 14225 AGTTCTACTCGTCGATCCGCATCGATGTGCGCCGCATCTCGTCCATCAAGGAAGGCGATG 14284 Query 67059 AGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACC 67118 || |||||||||||| ||| | ||||| |||||||| || ||| ||||| | Sbjct 14285 AGAACGTCGGCAACCGCGTCCGCGCCCGAGTCGTGAAGAACAAACTCGCCGCGCCGTTC- 14343 Query 67119 GCAAT--GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCT 67176 ||| ||||||||| | || ||| | ||||||||||| | | ||| ||| | Sbjct 14344 -AAATCCGCCGAGTTCGACATCATGTTCAACGAGGGCATCTCCCTCACAGGCGACCTCGT 14402 Query 67177 CGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGA 67236 |||||| | ||| | | ||| | || | ||||| || | ||||||| ||||| || Sbjct 14403 CGACCTCGGCGTCACCGAAGGCATCGTCGACAAGTCCGGATCGTGGTTCAGTTACGGCGA 14462 >seq7919 Length=968 Score = 201 bits (222), Expect = 5e-47 Identities = 391/574 (68%), Gaps = 10/574 (2%) Strand=Plus/Minus Query 66422 GGATCGGCTATGAAGCTGGGTGACAAGCCACAGACCG---TGGACGTCATTCCCACCGGC 66478 || |||| ||||||||||| | |||||| | | | | || | ||| ||||||| Sbjct 570 GGCTCGGTCATGAAGCTGGGAGCCAAGCCCAACATGGATATCGAGGCGATTTCCACCGGT 511 Query 66479 TCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAA 66538 || ||| |||||| || || || | ||||| ||| | |||||| | || ||| Sbjct 510 TCACTCGGGCTGGACATTGCACTCGGTGTTGGGGGTCTCCCCAAGGGCCGCATCGTTGAA 451 Query 66539 ATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCG 66598 || || ||||| || || || ||| | || || || ||| ||||||| | Sbjct 450 ATTTATGGCCCCGAGAGCTCTGGCAAGACGACGCTCGCGCTGCACACGGTGGCAGAGTGT 391 Query 66599 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTAC 66658 ||||||||||| |||| ||||||| | ||||| |||||| | || ||||| | || Sbjct 390 CAGAAGGCCGGCGGCACAGCCGCCTTTGTTGACGCGGAGCACGCGCTCGACCCGGTCTAT 331 Query 66659 GCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGCGAG 66718 |||||| ||| ||||||||| || | | ||| ||||| |||||| || |||| || Sbjct 330 GCCAAGAAGCTGGGTGTGGACGTCAGCGAACTCCTGGTGTCTCAGCCTGACGCCGGTGAA 271 Query 66719 CAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTT 66778 ||||| ||||| |||| |||| || || ||||||| | | | | | || | Sbjct 270 CAGGCGCTGGAAATCGCTGACACGCTGGTGCGCTCTGGCGCGATCGACGTACTGGTGATC 211 Query 66779 GACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCAC 66838 ||||| ||||| |||||| |||||||| || |||||||| || || || ||| || | Sbjct 210 GACTCGGTGGCTGCCCTGACCCCGCGCGCTGAACTCGAAGGTGAGATGGGTGAC--TCGC 153 Query 66839 GTC--GGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCATCT 66896 | || ||||| || || || ||| ||||| |||| ||||| || | |||||| Sbjct 152 TGCCGGGTCTGCAGGCTCGTCTGATGAGCCAGGCGCTGCGTAAGCTGACCGCGTCCATCT 93 Query 66897 CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGG 66956 ||| |||| |||||| | ||| |||||||| | || |||||| || ||| Sbjct 92 CCAAGTCCAATACGCTGGTGATCTTCATCAACCAGATCCGGATGAAGATTGG---TGTGA 36 Query 66957 GCTACGGCCCGAATGAGACCACCACGGGCGGAAA 66990 | |||| || || |||||||| ||||| || Sbjct 35 TGTTCGGCTCGCCGGAAACCACCACTGGCGGTAA 2 >seq10837 Length=771 Score = 170 bits (188), Expect = 9e-38 Identities = 360/531 (68%), Gaps = 17/531 (3%) Strand=Plus/Minus Query 66701 CAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 66760 || || || || ||||||||||| || ||||||| ||| || || || |||| Sbjct 718 CAACCAGACACAGGCGAGCAGGCGCTTGAGATCGCCGACACGCTGGTGCGCTCCGGCG-- 661 Query 66761 CTGTCCA--TCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAG 66818 | ||| | | | || || ||| ||||| |||||| ||||||||||||| | |||| Sbjct 660 CCGTCGAGGTGCTGGTGGTCGACAGTGTGGCCGCCCTGACGCCGCGCGCCGAGTTGGAAG 601 Query 66819 GCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCA 66878 |||| || || |||| || ||||||||||| ||||| | ||| ||||| |||||| Sbjct 600 GCGAGATGGGTGACACCCATGTCGGCCTGCAGGCGCGGTTGATGAGCCAGGCGCTGCGCA 541 Query 66879 AGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 66938 ||||||| || | ||||| | | ||| || | | | |||| ||| | ||| Sbjct 540 AGCTCACCGGGTCGATCTCGCGGTCGAACTGCATGGTGATTTTCATCAATCAGATTCGCA 481 Query 66939 AGAAGATCGGCAACGTGGGCTACGG----CCCGAATGAGACCACCACGGGCGGAAAGGCT 66994 ||||||||| ||| | ||| |||||| ||||| || ||||| || || Sbjct 480 TGAAGATCGG---TGTGATGTTCGGTAATCCCGAA----ACCACAACCGGCGGCAATGCG 428 Query 66995 TTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGC 67054 ||| || ||| |||| || || | ||| | || || |||| ||||| | Sbjct 427 CTGAAATTTTACTCCTCCGTGCGCCTCGATATTCGCCGGATCGGTCAAATCAAGGATAGT 368 Query 67055 GATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 67114 || |||| || ||||||| ||||| || || |||||||||||| |||| |||||| Sbjct 367 GACGAGGTCGTTGGCAACCAGACCCGTGTCCGCGTGGTCAAGAACAAGGTGGCGCCGCCG 308 Query 67115 CACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACT 67173 ||| | || ||| ||| | || |||| || || ||||| || | || || |||| | Sbjct 307 TTCCGGACTGTCGAATTCGACATCATGTATGGCGAAGGCATTTC-CAAGATGGGCGAATT 249 Query 67174 CCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 67224 |||||||| | |||| | || | || |||| |||||| ||||||| Sbjct 248 GCTCGACCTCGGCGTGAAGGCCGGTATCGTCGAGAAATCGGGCTCCTGGTT 198 >seq13113 Length=655 Score = 149 bits (164), Expect = 3e-31 Identities = 288/418 (69%), Gaps = 13/418 (3%) Strand=Plus/Minus Query 66701 CAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCG-A 66759 ||||||||| |||| |||||||| ||||| || | ||| || || || |||| | Sbjct 650 CAGCCCGATGCCGGTGAGCAGGCGCTGGAAATTGCTGATACGCTGGTACGTTCCGGCGCA 591 Query 66760 GCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGG 66819 || || | || | || || |||||||| ||| |||||| || || || ||||| Sbjct 590 ATTGATGTTC-TGGTGATCGATTCTGTGGCGGCTCTGACGCCGCGTGCAGAACTTGAAGG 532 Query 66820 CGACATCGGGGACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGC 66877 || || || || |||| | ||| |||| ||||| || ||| ||||| |||| Sbjct 531 TGAAATGGGCGAT--TCACTGCCCGGCTTGCAGGCGCGTCTGATGAGCCAGGCATTGCGG 474 Query 66878 AAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 66937 ||||| || | | | ||||| | |||| ||| || | ||| |||||||| | || Sbjct 473 AAGCTGACAGCCTCGATCTCGAAATCCAATACGATGGTGATCTTCATCAACCAGATTCGG 414 Query 66938 GAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTT 66995 ||||||||| | || | || ||||| || ||||| || || || || || Sbjct 413 ATGAAGATCGGTGTGATGTTTGGTA--GCCCG---GAAACCACAACAGGTGGTAACGCGC 359 Query 66996 TGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCG 67055 ||| ||| || ||||| || ||| | ||| | |||||||||| || ||||| ||| Sbjct 358 TGAAGTTTTATGCCTCTGTGCGTCTTGATATTCGTCGCATCGGTGCCATCAAGGACCGCG 299 Query 67056 ATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 67113 |||||| || ||||||| ||||| | ||||| |||||||||||||| || || || Sbjct 298 ATGAGGTGGTGGGCAACCAGACCCGTATCAAGGTGGTCAAGAACAAGCTTGCGCCACC 241 >seq439 Length=8113 Score = 140 bits (154), Expect = 2e-28 Identities = 407/619 (66%), Gaps = 21/619 (3%) Strand=Plus/Plus Query 66627 TCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACA 66686 ||||||| || ||| | || || || |||| || ||| || || ||||| || || Sbjct 1754 TCGACGCGGAACACGCGCTTGATCCGCAGTATGCGAAGCGTCTTGGCGTGGATCTGGATG 1813 Query 66687 ACCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCG 66746 | || | | ||||| |||||||| || ||||| || || |||||||| | | Sbjct 1814 AGCTGCTAATTTCCCAGCCTGATACCGGTGAACAGGCTCTCGAAATCGTTGATACGTTAG 1873 Query 66747 TCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCG 66806 | || |||| | | ||| || || || || || || ||||| || ||| Sbjct 1874 TGCGTTCCGGCGCGGTCAGCATGGTTGTTGTCGATTCGGTTGCGGCTTTGACGCCCAAAT 1933 Query 66807 CCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCAC 66866 | ||||||||||||||||| || ||||| |||||| ||||||| ||||| ||| | Sbjct 1934 CGGAGCTCGAAGGCGACATGGGCGACAGCTCGGTCGGCGTGCACGCCCGCCTGATGAGCC 1993 Query 66867 AGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAAC---ACGCTGACGCTCTGGG 66923 | || ||||||||||| || || |||| | | || | || | | | | Sbjct 1994 AAGCTATGCGCAAGCTGACCGGTTCCATTAACCGTTCCGGCTGTACCGTTA---TTTTCA 2050 Query 66924 TCAACCAGTTGCGCGAGAAGATCGGC--AACG-TGGGCTACGGCCCGAATGAGACCACCA 66980 | ||||| | || ||| |||||| || | | |||| ||||||| ||||| | Sbjct 2051 TTAACCAAATTCGGATGAAAATCGGCGTAATGTTTGGCT--CGCCCGAA----ACCACGA 2104 Query 66981 CGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCA 67040 |||| || || || | | ||||||| | || || || | ||| | |||||||||| | Sbjct 2105 CGGGTGGTAACGCGCTCAAGTTCTACTCTTCGGTTCGGCTTGATATTCGTCGCATCGGCG 2164 Query 67041 CCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACA 67100 | ||||| | || || || |||||| ||||| ||||| |||||||| |||| Sbjct 2165 CTCTCAAGGATCGTGACGAAATCGTGGGCAACGCGACCCGTGTGAAAGTCGTCAAAAACA 2224 Query 67101 AGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGC 67160 | | || ||||| | | | || ||| | || ||||||| || |||||||| Sbjct 2225 AAGTTGCGCCGCCCTTCAAACAGGTGGAATTCGACATCATGTACGGTGAAGGCATCTCCA 2284 Query 67161 GTGAGGTCGAACTCCTCGACCTGGCCGTGTC---GCAGGGCCTGGTGAAGAAGTCGGGCG 67217 || || || || ||||||| ||||| ||| ||| |||| | ||||| || | Sbjct 2285 AAATGGGTGAGCTGCTTGACCTGG--GTGTCAAGGCA-GGCGTGGTCGACAAGTCCGGTG 2341 Query 67218 CCTGGTTCAAGTACGGGGA 67236 | ||||||| ||||| || Sbjct 2342 CGTGGTTCAGCTACGGTGA 2360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242811734301318