Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq388 105 2e-18 >seq388 Length=8708 Score = 105 bits (116), Expect = 2e-18 Identities = 444/689 (64%), Gaps = 19/689 (3%) Strand=Plus/Minus Query 4338 CGAGCTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTT 4397 ||| |||||| || ||||||||| | |||| || | ||||| || ||||| | || Sbjct 1776 CGATCTGTGGAACCGCGTCATGCGCGCGACCTATGATTATGCCGAACCCGGCGTGATCTT 1717 Query 4398 CATCGACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCAA 4457 |||||| ||||| | ||||| || | || |||| || ||||| || || Sbjct 1716 TATCGACCGGATCAATCAGGCCAACAACCTGAGCTATGTCGAGACCATCGCGGCGACAAA 1657 Query 4458 CCCGTGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACCT 4517 ||| || || || || || ||||| || | || ||||||||||| || || ||||| | Sbjct 1656 CCCCTGTGGTGAACAACCCCTGCCGCCCTATGGTGCCTGCCTGCTGGGGTCGATCAACAT 1597 Query 4518 GGTGCGCTATCTG-CGG-CGCGA-CATGGTTG--GCTGGTCCTTCGA-CTGGTGCCAGCT 4571 || ||| || ||| | || | || || || | | || || |||| | ||| Sbjct 1596 GGCGCGGCTGGTGACGGACCCGTTCGAGGATGCGGCCGCT--TTGGATCTGGACGC-GCT 1540 Query 4572 CGCCGAGGACATCCCGGTCGTCGTGCGCGCCATGGACAACGTGGTCGACCGGGCCCGCTA 4631 ||| || || || |||||| ||||||||||| || ||| | || | Sbjct 1539 GAACGAACTGGTCGCGACCGCCGTGCGGATGATGGACAACGTTGTGGACGCCTCGCGGTT 1480 Query 4632 CCCGTTGCCGCAGCAGGAGCAGGAGGCGAGGTCCAAACGCCGGATGGGCCTGGGTGTGAC 4691 |||||| | |||| | |||||| ||||||| || || ||| ||||||| || Sbjct 1479 TCCGTTGGAGGCGCAGCGGGCGGAGGCACATGCCAAACGGCGCATCGGCTTGGGTGTAAC 1420 Query 4692 CGCCCTGGCGAACGCGGGCGAGGCCCTGGGCCACCCCTACGGCTCGCCCGGCTTCCTGGA 4751 || |||||| | ||| | || || | | ||| |||||| || | | Sbjct 1419 CGGGCTGGCGGATGCGCTTTTGATGCTAGGTCTGCGCTATGGCTCGGACGAGG--CGGCG 1362 Query 4752 CTTCAC-CCG----CCGCGTGCTGACGATGGTGCGCGACGAGTCCTACCGCGCGTCGGCC 4806 | || ||| | | ||| |||| | |||| || || | | ||||| | Sbjct 1361 CGCCAGACCGAGGACTGGTTGCACGCGATTGCCCGCGCCGCGT---ATCTGGCGTCAGTG 1305 Query 4807 CTGTTGGCCCATGAGAAGGGCTCCTTCCCGCTCTTCGAGGCCGAGCAGTACCTGGAGTCC 4866 | |||||| | || ||||| | |||||||||||||| ||||| ||||||| | ||| Sbjct 1304 CAATTGGCCAAGGAAAAGGGTGCGTTCCCGCTCTTCGATGCCGACAAGTACCTTGCATCC 1245 Query 4867 GCCTTCGTGAAGACCCTGCCCGAGGACGTCCGCGAGATGATCGCCGAGCTGGGCATCCGC 4926 | | | || ||| || ||||||||| ||||| |||| || | ||||||||| Sbjct 1244 GGCACCATGCAGATGATGGACGAGGACGTGCGCGACGCGATCCGAGAACACGGCATCCGC 1185 Query 4927 AACTCCCACCTGACCTCCATCGCGCCGACCGGCACCATCAGCCTGTGCGCCGACAACGTG 4986 ||| | | || || || || |||||||| || || ||| || | ||| | ||||||| Sbjct 1184 AACGCGCTGCTCACGTCGATTGCGCCGACGGGGACGATCTCGCTTTACGCTGGCAACGTG 1125 Query 4987 AGCTCCGGCCTGGAGCCCGTGTTCTCCTA 5015 || || | ||||| || || |||| Sbjct 1124 TCATCGGGGATCGAGCCGGTTTTTGCCTA 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176189309975180